Annotation Detail for POLDIP3


Gene Symbol: | POLDIP3 ( KIAA1649,PDIP46,SKAR ) |
---|---|
Gene Full Name: | polymerase (DNA-directed), delta interacting protein 3 |
Band: | 22q13.2 |
Quick Links | Entrez ID:84271; OMIM: 611520; Uniprot ID:PDIP3_HUMAN; ENSEMBL ID: ENSG00000100227; HGNC ID: 23782 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.709070
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
embryoid body | 23 / 70761 | 325 | ![]() |
blastocyst | 16 / 62319 | 256 | ![]() |
fetus | 137 / 564012 | 242 | ![]() |
neonate | 2 / 31097 | 64 | ![]() |
infant | 0 / 23620 | 0 | |
juvenile | 8 / 55556 | 143 | ![]() |
adult | 249 / 1939121 | 128 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adrenal tumor | 2 / 12794 | 156 | ![]() |
bladder carcinoma | 1 / 17475 | 57 | ![]() |
breast (mammary gland) tumor | 6 / 94178 | 63 | ![]() |
cervical tumor | 3 / 34366 | 87 | ![]() |
chondrosarcoma | 11 / 82823 | 132 | ![]() |
colorectal tumor | 17 / 114246 | 148 | ![]() |
esophageal tumor | 1 / 17290 | 57 | ![]() |
gastrointestinal tumor | 10 / 119369 | 83 | ![]() |
germ cell tumor | 102 / 263845 | 386 | ![]() |
glioma | 29 / 106883 | 271 | ![]() |
head and neck tumor | 39 / 136302 | 286 | ![]() |
kidney tumor | 10 / 68959 | 145 | ![]() |
leukemia | 19 / 95842 | 198 | ![]() |
liver tumor | 15 / 96359 | 155 | ![]() |
lung tumor | 11 / 103127 | 106 | ![]() |
lymphoma | 27 / 71755 | 376 | ![]() |
non-neoplasia | 15 / 97250 | 154 | ![]() |
normal | 606 / 3360307 | 180 | ![]() |
ovarian tumor | 8 / 76682 | 104 | ![]() |
pancreatic tumor | 7 / 104616 | 66 | ![]() |
primitive neuroectodermal tumor of the CNS | 42 / 125680 | 334 | ![]() |
prostate cancer | 5 / 102680 | 48 | ![]() |
retinoblastoma | 3 / 46356 | 64 | ![]() |
skin tumor | 40 / 124949 | 320 | ![]() |
soft tissue/muscle tissue tumor | 33 / 125191 | 263 | ![]() |
uterine tumor | 14 / 90257 | 155 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adipose tissue | 1 / 13106 | 76 | ![]() |
adrenal gland | 4 / 33197 | 120 | ![]() |
ascites | 5 / 40015 | 124 | ![]() |
bladder | 3 / 29757 | 100 | ![]() |
blood | 16 / 123478 | 129 | ![]() |
bone | 5 / 71655 | 69 | ![]() |
bone marrow | 6 / 48801 | 122 | ![]() |
brain | 375 / 1100989 | 340 | ![]() |
cervix | 9 / 48171 | 186 | ![]() |
connective tissue | 28 / 149255 | 187 | ![]() |
ear | 1 / 16212 | 61 | ![]() |
embryonic tissue | 47 / 215722 | 217 | ![]() |
esophagus | 1 / 20209 | 49 | ![]() |
eye | 18 / 211054 | 85 | ![]() |
heart | 12 / 89626 | 133 | ![]() |
intestine | 23 / 234472 | 98 | ![]() |
kidney | 19 / 211777 | 89 | ![]() |
larynx | 3 / 24145 | 124 | ![]() |
liver | 18 / 207743 | 86 | ![]() |
lung | 31 / 336974 | 91 | ![]() |
lymph | 21 / 44270 | 474 | ![]() |
lymph node | 17 / 91610 | 185 | ![]() |
mammary gland | 15 / 153271 | 97 | ![]() |
mouth | 33 / 67052 | 492 | ![]() |
muscle | 24 / 107715 | 222 | ![]() |
nerve | 0 / 15768 | 0 | |
ovary | 19 / 102051 | 186 | ![]() |
pancreas | 14 / 214812 | 65 | ![]() |
parathyroid | 2 / 20539 | 97 | ![]() |
pharynx | 4 / 41328 | 96 | ![]() |
pituitary gland | 0 / 16585 | 0 | |
placenta | 65 / 280825 | 231 | ![]() |
prostate | 12 / 189345 | 63 | ![]() |
salivary gland | 0 / 20155 | 0 | |
skin | 44 / 210574 | 208 | ![]() |
spleen | 8 / 53952 | 148 | ![]() |
stomach | 5 / 96619 | 51 | ![]() |
testis | 108 / 330442 | 326 | ![]() |
thymus | 92 / 81131 | 1133 | ![]() |
thyroid | 3 / 47473 | 63 | ![]() |
tonsil | 0 / 16999 | 0 | |
trachea | 47 / 52413 | 896 | ![]() |
umbilical cord | 5 / 13680 | 365 | ![]() |
uterus | 40 / 232878 | 171 | ![]() |
vascular | 3 / 51780 | 57 | ![]() |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 210583_at
Cell line | Expression level | Expression bar |
---|---|---|
![]() | ||
721_B_lymphoblasts | 11.35 | ![]() |
Adipocyte | 11.4 | ![]() |
AdrenalCortex | 12.45 | ![]() |
Adrenalgland | 11.7 | ![]() |
Amygdala | 11.75 | ![]() |
Appendix | 36.65 | ![]() |
AtrioventricularNode | 13.8 | ![]() |
BDCA4+_DentriticCells | 12.45 | ![]() |
Bonemarrow | 13.5 | ![]() |
BronchialEpithelialCells | 10.05 | ![]() |
CD105+_Endothelial | 10.9 | ![]() |
CD14+_Monocytes | 11.15 | ![]() |
CD19+_BCells(neg._sel.) | 11.2 | ![]() |
CD33+_Myeloid | 13.7 | ![]() |
CD34+ | 12.6 | ![]() |
CD4+_Tcells | 11.5 | ![]() |
CD56+_NKCells | 12.2 | ![]() |
CD71+_EarlyErythroid | 10.85 | ![]() |
CD8+_Tcells | 8.35 | ![]() |
CardiacMyocytes | 14.75 | ![]() |
Caudatenucleus | 15.75 | ![]() |
Cerebellum | 16.8 | ![]() |
CerebellumPeduncles | 21.95 | ![]() |
CiliaryGanglion | 16 | ![]() |
CingulateCortex | 20.6 | ![]() |
Colorectaladenocarcinoma | 10.5 | ![]() |
DorsalRootGanglion | 17.95 | ![]() |
FetalThyroid | 13.9 | ![]() |
Fetalbrain | 12.5 | ![]() |
Fetalliver | 10.35 | ![]() |
Fetallung | 9.65 | ![]() |
GlobusPallidus | 15.35 | ![]() |
Heart | 14.2 | ![]() |
Hypothalamus | 12.75 | ![]() |
Kidney | 13.25 | ![]() |
Leukemia_chronicMyelogenousK-562 | 10.65 | ![]() |
Leukemia_promyelocytic-HL-60 | 10.45 | ![]() |
Leukemialymphoblastic(MOLT-4) | 11.7 | ![]() |
Liver | 15.75 | ![]() |
Lung | 19.75 | ![]() |
Lymphnode | 10.15 | ![]() |
Lymphoma_burkitts(Daudi) | 23 | ![]() |
Lymphoma_burkitts(Raji) | 14.15 | ![]() |
MedullaOblongata | 14.05 | ![]() |
OccipitalLobe | 11.85 | ![]() |
OlfactoryBulb | 11.9 | ![]() |
Ovary | 10.4 | ![]() |
Pancreas | 9.15 | ![]() |
PancreaticIslet | 12.4 | ![]() |
ParietalLobe | 17.95 | ![]() |
Pituitary | 16.8 | ![]() |
Placenta | 10.55 | ![]() |
Pons | 17.25 | ![]() |
PrefrontalCortex | 14.15 | ![]() |
Prostate | 13.3 | ![]() |
Salivarygland | 9.45 | ![]() |
SkeletalMuscle | 26.15 | ![]() |
Skin | 18.9 | ![]() |
SmoothMuscle | 17.9 | ![]() |
Spinalcord | 12.85 | ![]() |
SubthalamicNucleus | 10.95 | ![]() |
SuperiorCervicalGanglion | 16 | ![]() |
TemporalLobe | 16.75 | ![]() |
Testis | 10.85 | ![]() |
TestisGermCell | 9.5 | ![]() |
TestisIntersitial | 9.9 | ![]() |
TestisLeydigCell | 19.8 | ![]() |
TestisSeminiferousTubule | 17.7 | ![]() |
Thalamus | 16.35 | ![]() |
Thymus | 8.85 | ![]() |
Thyroid | 13.25 | ![]() |
Tongue | 12.3 | ![]() |
Tonsil | 11.45 | ![]() |
Trachea | 11.5 | ![]() |
TrigeminalGanglion | 12.05 | ![]() |
Uterus | 7.85 | ![]() |
UterusCorpus | 10.6 | ![]() |
WholeBlood | 12.45 | ![]() |
Wholebrain | 9.2 | ![]() |
colon | 9.55 | ![]() |
pineal_day | 12.4 | ![]() |
pineal_night | 9.44 | ![]() |
retina | 12.25 | ![]() |
small_intestine | 9.75 | ![]() |
- Probe name: CUST_5510_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 4.46 ± 0.45 | ![]() ![]() ![]() |
Basal Forebrain | 4.46 ± 0.44 | ![]() ![]() ![]() |
Basal Part of Pons | 4.47 ± 0.38 | ![]() ![]() ![]() |
Cerebellar Cortex | 4.54 ± 0.64 | ![]() ![]() ![]() |
Cerebellar Nuclei | 4.46 ± 0.46 | ![]() ![]() ![]() |
Claustrum | 4.1 ± 0.85 | ![]() ![]() ![]() |
Epithalamus | 4.35 ± 0.45 | ![]() ![]() ![]() |
Frontal Lobe | 4.18 ± 0.43 | ![]() ![]() ![]() |
Globus Pallidus | 4.73 ± 0.48 | ![]() ![]() ![]() |
Hypothalamus | 3.74 ± 0.8 | ![]() ![]() ![]() |
Insula | 4.21 ± 0.5 | ![]() ![]() ![]() |
Limbic Lobe | 4.32 ± 0.49 | ![]() ![]() ![]() |
Mesencephalon | 4.22 ± 0.56 | ![]() ![]() ![]() |
Myelencephalon | 4.26 ± 0.53 | ![]() ![]() ![]() |
Occipital Lobe | 4.44 ± 0.47 | ![]() ![]() ![]() |
Parietal Lobe | 4.29 ± 0.63 | ![]() ![]() ![]() |
Pontine Tegmentum | 4.37 ± 0.57 | ![]() ![]() ![]() |
Striatum | 4.47 ± 0.57 | ![]() ![]() ![]() |
Subthalamus | 4.33 ± 0.46 | ![]() ![]() ![]() |
Temporal Lobe | 4.2 ± 0.48 | ![]() ![]() ![]() |
Thalamus | 4.25 ± 0.52 | ![]() ![]() ![]() |
White Matter | 5.58 ± 0.61 | ![]() ![]() ![]() |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
Poldip3 | CB | Cerebellum | 2.46 | ![]() |
3.18 | ![]() | |||
Poldip3 | CTX | Cerebral cortex | 1.62 | ![]() |
1.33 | ![]() | |||
Poldip3 | HIP | Hippocampal region | 2.12 | ![]() |
2.16 | ![]() | |||
Poldip3 | HPF | Hippocampal formation | 1.43 | ![]() |
1.4 | ![]() | |||
Poldip3 | HY | Hypothalamus | 2.4 | ![]() |
3.77 | ![]() | |||
Poldip3 | LSX | Lateral septal complex | 0.53 | ![]() |
0.56 | ![]() | |||
Poldip3 | MB | Midbrain | 1.77 | ![]() |
1.75 | ![]() | |||
Poldip3 | MY | Medulla | 1.74 | ![]() |
1.77 | ![]() | |||
Poldip3 | OLF | Olfactory bulb | 2.66 | ![]() |
2.64 | ![]() | |||
Poldip3 | P | Pons | 1.26 | ![]() |
1.22 | ![]() | |||
Poldip3 | PAL | Pallidum | 0.53 | ![]() |
0.63 | ![]() | |||
Poldip3 | RHP | Retrohippocampal region | 0.33 | ![]() |
0.34 | ![]() | |||
Poldip3 | sAMY | Striatum-like amygdalar nuclei | 0.93 | ![]() |
1.1 | ![]() | |||
Poldip3 | STR | Striatum | 0.91 | ![]() |
0.89 | ![]() | |||
Poldip3 | STRd | Striatum dorsal region | 1 | ![]() |
0.99 | ![]() | |||
Poldip3 | STRv | Striatum ventral region | 0.73 | ![]() |
0.62 | ![]() | |||
Poldip3 | TH | Thalamus | 0.97 | ![]() |
0.97 | ![]() |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
PAp00001230 | 19 | 346 | 364 | CNLHMNGNVITSDQPILLR | Peptide Atlas |
PDIP3_HUMAN_156 | 13 | 156 | 168 | AMAPLHPHPAGMR | PRIDE |
PDIP3_HUMAN_2 | 10 | 2 | 11 | ADISLDELIR | PRIDE |
PDIP3_HUMAN_201 | 18 | 201 | 218 | FAASGGFLHHMAGLSSSK | PRIDE |
PDIP3_HUMAN_282 | 9 | 282 | 290 | MTVNNLHPR | PRIDE |
PDIP3_HUMAN_86 | 10 | 86 | 95 | RIKGKVQDAR | PRIDE |