Annotation Detail for RNF135
Basic Information Top
| Gene Symbol: | RNF135 ( MGC13061,REUL,Riplet ) |
|---|---|
| Gene Full Name: | ring finger protein 135 |
| Band: | 17q11.2 |
| Quick Links | Entrez ID:84282; OMIM: 611358; Uniprot ID:RN135_HUMAN; ENSEMBL ID: ENSG00000181481; HGNC ID: 21158 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.29874
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 27 / 1939121 | 13 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 12 / 263845 | 45 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 7 / 68959 | 101 |  |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 44 / 3360307 | 13 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 3 / 123478 | 24 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 6 / 1100989 | 5 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 1 / 89626 | 11 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 11 / 211777 | 51 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 7 / 153271 | 45 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 16 / 280825 | 56 | |
| prostate | 8 / 189345 | 42 | |
| salivary gland | 3 / 20155 | 148 | |
| skin | 3 / 210574 | 14 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 1 / 96619 | 10 | |
| testis | 8 / 330442 | 24 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P39759
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.37 ± 0.84 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.46 ± 0.64 | |
| Basal Part of Pons | 2.77 ± 0.71 | |
| Cerebellar Cortex | 3.06 ± 0.58 | |
| Cerebellar Nuclei | 3.68 ± 0.83 | |
| Claustrum | 3.68 ± 0.6 | |
| Epithalamus | 3.85 ± 0.27 | |
| Frontal Lobe | 3.16 ± 0.69 | |
| Globus Pallidus | 4.79 ± 0.46 | |
| Hypothalamus | 3.4 ± 0.75 | |
| Insula | 3.22 ± 0.78 | |
| Limbic Lobe | 3.08 ± 0.8 | |
| Mesencephalon | 3.64 ± 0.67 | |
| Myelencephalon | 3.4 ± 0.7 | |
| Occipital Lobe | 3.45 ± 0.69 | |
| Parietal Lobe | 3.2 ± 0.79 | |
| Pontine Tegmentum | 3.41 ± 0.64 | |
| Striatum | 3.76 ± 0.76 | |
| Subthalamus | 3.67 ± 0.9 | |
| Temporal Lobe | 3.13 ± 0.64 | |
| Thalamus | 3.47 ± 0.5 | |
| White Matter | 4.28 ± 0.8 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Rnf135 | CB | Cerebellum | 3.86 | |
| 5.44 | | |||
| Rnf135 | CTX | Cerebral cortex | 2.37 | |
| 2.43 | | |||
| Rnf135 | HIP | Hippocampal region | 2.46 | |
| 2.62 | | |||
| Rnf135 | HPF | Hippocampal formation | 2.26 | |
| 2.39 | | |||
| Rnf135 | HY | Hypothalamus | 4.06 | |
| 3.11 | | |||
| Rnf135 | LSX | Lateral septal complex | 1.3 | |
| 1.47 | | |||
| Rnf135 | MB | Midbrain | 2.16 | |
| 2.47 | | |||
| Rnf135 | MY | Medulla | 2.37 | |
| 2.51 | | |||
| Rnf135 | OLF | Olfactory bulb | 3.72 | |
| 4 | | |||
| Rnf135 | P | Pons | 2.81 | |
| 3.46 | | |||
| Rnf135 | PAL | Pallidum | 1.72 | |
| 1.48 | | |||
| Rnf135 | RHP | Retrohippocampal region | 1.85 | |
| 2.09 | | |||
| Rnf135 | sAMY | Striatum-like amygdalar nuclei | 2.91 | |
| 2.23 | | |||
| Rnf135 | STR | Striatum | 1.72 | |
| 1.56 | | |||
| Rnf135 | STRd | Striatum dorsal region | 1.48 | |
| 1.49 | | |||
| Rnf135 | STRv | Striatum ventral region | 1.92 | |
| 1.37 | | |||
| Rnf135 | TH | Thalamus | 1.47 | |
| 1.76 | |