Annotation Detail for NUDT16L1
Basic Information Top
| Gene Symbol: | NUDT16L1 ( MGC11275,SDOS ) |
|---|---|
| Gene Full Name: | nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:84309; OMIM: NA; Uniprot ID:SDOS_HUMAN; ENSEMBL ID: ENSG00000168101; HGNC ID: 28154 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.513315
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 4 / 62319 | 64 |  |
| fetus | 11 / 564012 | 19 | |
| neonate | 0 / 31097 | 0 | |
| infant | 2 / 23620 | 84 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 92 / 1939121 | 47 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 9 / 119369 | 75 | |
| germ cell tumor | 2 / 263845 | 7 |  |
| glioma | 8 / 106883 | 74 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 8 / 95842 | 83 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 12 / 103127 | 116 | |
| lymphoma | 9 / 71755 | 125 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 105 / 3360307 | 31 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 9 / 104616 | 86 | |
| primitive neuroectodermal tumor of the CNS | 9 / 125680 | 71 | |
| prostate cancer | 13 / 102680 | 126 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 10 / 125191 | 79 | |
| uterine tumor | 6 / 90257 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 8 / 123478 | 64 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 44 / 1100989 | 39 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 14 / 215722 | 64 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 7 / 211054 | 33 | |
| heart | 2 / 89626 | 22 | |
| intestine | 11 / 234472 | 46 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 22 / 336974 | 65 | |
| lymph | 9 / 44270 | 203 |  |
| lymph node | 5 / 91610 | 54 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 7 / 107715 | 64 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 12 / 214812 | 55 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 15 / 280825 | 53 | |
| prostate | 22 / 189345 | 116 | |
| salivary gland | 2 / 20155 | 99 | |
| skin | 2 / 210574 | 9 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 7 / 96619 | 72 | |
| testis | 2 / 330442 | 6 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 11 / 232878 | 47 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_24_P399065
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.24 ± 0.45 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.45 ± 0.22 | |
| Basal Part of Pons | 6.63 ± 0.24 | |
| Cerebellar Cortex | 6.63 ± 0.46 | |
| Cerebellar Nuclei | 6.48 ± 0.32 | |
| Claustrum | 6.1 ± 0.35 | |
| Epithalamus | 6.33 ± 0.48 | |
| Frontal Lobe | 6.63 ± 0.4 | |
| Globus Pallidus | 6.23 ± 0.18 | |
| Hypothalamus | 6.48 ± 0.37 | |
| Insula | 6.72 ± 0.32 | |
| Limbic Lobe | 6.47 ± 0.43 | |
| Mesencephalon | 6.42 ± 0.41 | |
| Myelencephalon | 6.51 ± 0.41 | |
| Occipital Lobe | 6.06 ± 0.31 | |
| Parietal Lobe | 6.33 ± 0.4 | |
| Pontine Tegmentum | 6.33 ± 0.56 | |
| Striatum | 6.28 ± 0.32 | |
| Subthalamus | 6.29 ± 0.28 | |
| Temporal Lobe | 6.64 ± 0.39 | |
| Thalamus | 6.54 ± 0.38 | |
| White Matter | 6.37 ± 0.3 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Nudt16l1 | CB | Cerebellum | 22.35 | |
| 30.32 | | |||
| Nudt16l1 | CTX | Cerebral cortex | 49.95 | |
| 37.72 | | |||
| Nudt16l1 | HIP | Hippocampal region | 33.01 | |
| 39.45 | | |||
| Nudt16l1 | HPF | Hippocampal formation | 37.59 | |
| 38.41 | | |||
| Nudt16l1 | HY | Hypothalamus | 4.04 | |
| 2.98 | | |||
| Nudt16l1 | LSX | Lateral septal complex | 24.68 | |
| 20.42 | | |||
| Nudt16l1 | MB | Midbrain | 17.84 | |
| 18.88 | | |||
| Nudt16l1 | MY | Medulla | 12.72 | |
| 11.12 | | |||
| Nudt16l1 | OLF | Olfactory bulb | 26.18 | |
| 20.61 | | |||
| Nudt16l1 | P | Pons | 13.86 | |
| 14.24 | | |||
| Nudt16l1 | PAL | Pallidum | 5.8 | |
| 4.62 | | |||
| Nudt16l1 | RHP | Retrohippocampal region | 44.58 | |
| 36.91 | | |||
| Nudt16l1 | sAMY | Striatum-like amygdalar nuclei | 8.48 | |
| 6.32 | | |||
| Nudt16l1 | STR | Striatum | 16.29 | |
| 11.47 | | |||
| Nudt16l1 | STRd | Striatum dorsal region | 17.08 | |
| 11.94 | | |||
| Nudt16l1 | STRv | Striatum ventral region | 14.74 | |
| 9.47 | | |||
| Nudt16l1 | TH | Thalamus | 9.62 | |
| 7.36 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00381554 | 17 | 91 | 107 | LTEADYLSSHLTEGPHR | Peptide Atlas |
| SDOS_HUMAN_2 | 13 | 2 | 14 | STAAVPELKQISR | PRIDE |