Annotation Detail for C16orf13
Basic Information Top
| Gene Symbol: | C16orf13 ( MGC13114 ) |
|---|---|
| Gene Full Name: | chromosome 16 open reading frame 13 |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:84326; OMIM: NA; Uniprot ID:CP013_HUMAN; ENSEMBL ID: ENSG00000130731,ENSG00000248465,ENSG00000249124,EN; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.239500
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 14 / 564012 | 24 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 59 / 1939121 | 30 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 13 / 106883 | 121 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 6 / 96359 | 62 | |
| lung tumor | 6 / 103127 | 58 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 |  |
| normal | 95 / 3360307 | 28 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 9 / 102680 | 87 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 37 / 1100989 | 33 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 4 / 211054 | 18 | |
| heart | 6 / 89626 | 66 | |
| intestine | 13 / 234472 | 55 | |
| kidney | 11 / 211777 | 51 | |
| larynx | 1 / 24145 | 41 | |
| liver | 7 / 207743 | 33 | |
| lung | 56 / 336974 | 166 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 13 / 189345 | 68 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 6 / 210574 | 28 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 2 / 96619 | 20 | |
| testis | 9 / 330442 | 27 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 13 / 232878 | 55 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P206498
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 11.2 ± 0.21 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 10.76 ± 0.14 | |
| Basal Part of Pons | 11.23 ± 0.12 | |
| Cerebellar Cortex | 10.77 ± 0.16 | |
| Cerebellar Nuclei | 10.48 ± 0.23 | |
| Claustrum | 10.96 ± 0.13 | |
| Epithalamus | 10.54 ± 0.28 | |
| Frontal Lobe | 10.92 ± 0.23 | |
| Globus Pallidus | 10.32 ± 0.26 | |
| Hypothalamus | 10.74 ± 0.14 | |
| Insula | 10.99 ± 0.2 | |
| Limbic Lobe | 10.99 ± 0.23 | |
| Mesencephalon | 10.69 ± 0.17 | |
| Myelencephalon | 10.85 ± 0.26 | |
| Occipital Lobe | 10.67 ± 0.19 | |
| Parietal Lobe | 10.9 ± 0.23 | |
| Pontine Tegmentum | 10.74 ± 0.19 | |
| Striatum | 11.04 ± 0.27 | |
| Subthalamus | 10.67 ± 0.14 | |
| Temporal Lobe | 10.96 ± 0.23 | |
| Thalamus | 10.81 ± 0.17 | |
| White Matter | 10.2 ± 0.07 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 0610011F06Rik | CB | Cerebellum | 7.7 | |
| 9.07 | | |||
| 0610011F06Rik | CTX | Cerebral cortex | 1.72 | |
| 1.44 | | |||
| 0610011F06Rik | HIP | Hippocampal region | 5.63 | |
| 6.93 | | |||
| 0610011F06Rik | HPF | Hippocampal formation | 4.26 | |
| 4.72 | | |||
| 0610011F06Rik | HY | Hypothalamus | 3.5 | |
| 2.71 | | |||
| 0610011F06Rik | LSX | Lateral septal complex | 1.4 | |
| 1.24 | | |||
| 0610011F06Rik | MB | Midbrain | 3.6 | |
| 3.41 | | |||
| 0610011F06Rik | MY | Medulla | 10.91 | |
| 12.39 | | |||
| 0610011F06Rik | OLF | Olfactory bulb | 4.05 | |
| 4.34 | | |||
| 0610011F06Rik | P | Pons | 6.19 | |
| 6.89 | | |||
| 0610011F06Rik | PAL | Pallidum | 1.53 | |
| 1.37 | | |||
| 0610011F06Rik | RHP | Retrohippocampal region | 1.49 | |
| 1.14 | | |||
| 0610011F06Rik | sAMY | Striatum-like amygdalar nuclei | 0.99 | |
| 0.75 | | |||
| 0610011F06Rik | STR | Striatum | 0.69 | |
| 0.59 | | |||
| 0610011F06Rik | STRd | Striatum dorsal region | 0.58 | |
| 0.53 | | |||
| 0610011F06Rik | STRv | Striatum ventral region | 0.53 | |
| 0.42 | | |||
| 0610011F06Rik | TH | Thalamus | 3.18 | |
| 2.68 | |