AutismKB 2.0

Annotation Detail for RASAL1


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Basic Information Top
Gene Symbol:RASAL1 ( RASAL )
Gene Full Name: RAS protein activator like 1 (GAP1 like)
Band: 12q24.13
Quick LinksEntrez ID:8437; OMIM: 604118; Uniprot ID:RASL1_HUMAN; ENSEMBL ID: ENSG00000111344; HGNC ID: 9873
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus1 / 5640121
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult13 / 19391216
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia3 / 9584231
liver tumor0 / 963590 
lung tumor5 / 10312748
lymphoma16 / 71755222
non-neoplasia2 / 9725020
normal21 / 33603076
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland3 / 3319790
ascites2 / 4001549
bladder0 / 297570 
blood3 / 12347824
bone0 / 716550 
bone marrow0 / 488010 
brain12 / 110098910
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye4 / 21105418
heart0 / 896260 
intestine2 / 2344728
kidney1 / 2117774
larynx0 / 241450 
liver0 / 2077430 
lung7 / 33697420
lymph9 / 44270203
lymph node2 / 9161021
mammary gland1 / 1532716
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx2 / 4132848
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin1 / 2105744
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil2 / 16999117
trachea3 / 5241357
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219752_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.35
Adipocyte7.5
AdrenalCortex8.95
Adrenalgland7.75
Amygdala15.2
Appendix7.55
AtrioventricularNode5.6
BDCA4+_DentriticCells7.55
Bonemarrow7.6
BronchialEpithelialCells7.55
CD105+_Endothelial7.2
CD14+_Monocytes8.2
CD19+_BCells(neg._sel.)8.2
CD33+_Myeloid9.55
CD34+9.15
CD4+_Tcells8.45
CD56+_NKCells8.9
CD71+_EarlyErythroid7
CD8+_Tcells7.55
CardiacMyocytes9.35
Caudatenucleus8.75
Cerebellum6.15
CerebellumPeduncles8.6
CiliaryGanglion5.2
CingulateCortex10.95
Colorectaladenocarcinoma7.6
DorsalRootGanglion5.6
FetalThyroid7.4
Fetalbrain7.65
Fetalliver6.5
Fetallung6.15
GlobusPallidus5.5
Heart9.4
Hypothalamus11.6
Kidney6.25
Leukemia_chronicMyelogenousK-5626.85
Leukemia_promyelocytic-HL-607.9
Leukemialymphoblastic(MOLT-4)6.15
Liver9.9
Lung8.45
Lymphnode6.65
Lymphoma_burkitts(Daudi)12.4
Lymphoma_burkitts(Raji)23.55
MedullaOblongata7.05
OccipitalLobe9.25
OlfactoryBulb6
Ovary5.15
Pancreas6.15
PancreaticIslet8.05
ParietalLobe8.35
Pituitary8.9
Placenta7.5
Pons7.2
PrefrontalCortex10.9
Prostate9
Salivarygland6.15
SkeletalMuscle8.95
Skin5.65
SmoothMuscle8.55
Spinalcord8.1
SubthalamicNucleus6.85
SuperiorCervicalGanglion8.35
TemporalLobe7.8
Testis6.5
TestisGermCell6.2
TestisIntersitial6.35
TestisLeydigCell7.5
TestisSeminiferousTubule6.55
Thalamus8.45
Thymus6.1
Thyroid11.55
Tongue7.5
Tonsil7.8
Trachea7.45
TrigeminalGanglion7.5
Uterus6.25
UterusCorpus6.65
WholeBlood8.45
Wholebrain14.7
colon7.65
pineal_day8.76
pineal_night8.82
retina8.825
small_intestine6.95
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_10975_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.16 ± 0.79
Basal Forebrain3.68 ± 0.46
Basal Part of Pons3.63 ± 0.78
Cerebellar Cortex3.16 ± 0.53
Cerebellar Nuclei3.45 ± 0.61
Claustrum3.6 ± 1.45
Epithalamus3.2 ± 0.8
Frontal Lobe4.44 ± 0.85
Globus Pallidus3.75 ± 1.13
Hypothalamus3.62 ± 0.85
Insula4.8 ± 0.56
Limbic Lobe4.61 ± 0.98
Mesencephalon3.94 ± 0.9
Myelencephalon3.97 ± 0.74
Occipital Lobe2.9 ± 1.06
Parietal Lobe3.9 ± 0.82
Pontine Tegmentum4.07 ± 0.82
Striatum3.66 ± 1.21
Subthalamus3.53 ± 0.76
Temporal Lobe4.67 ± 0.77
Thalamus3.52 ± 0.97
White Matter4.94 ± 0.37
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rasal1CBCerebellum7.11
6.7
Rasal1CTXCerebral cortex100
96.08
Rasal1HIPHippocampal region53.66
71.63
Rasal1HPFHippocampal formation98.12
99.85
Rasal1HYHypothalamus28.17
14.54
Rasal1LSXLateral septal complex43.98
16.52
Rasal1MBMidbrain8.61
4.19
Rasal1MYMedulla9.55
5.67
Rasal1OLFOlfactory bulb100
83.84
Rasal1PPons8.17
5.2
Rasal1PALPallidum34.25
18.45
Rasal1RHPRetrohippocampal region100
100
Rasal1sAMYStriatum-like amygdalar nuclei100
64.64
Rasal1STRStriatum38.58
20.49
Rasal1STRdStriatum dorsal region13.62
7.17
Rasal1STRvStriatum ventral region72.38
34.44
Rasal1THThalamus14.78
8.27
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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