Annotation Detail for RAB11FIP4
Basic Information Top
| Gene Symbol: | RAB11FIP4 ( FLJ00131,KIAA1821,MGC11316,MGC126566,RAB11-FIP4 ) |
|---|---|
| Gene Full Name: | RAB11 family interacting protein 4 (class II) |
| Band: | 17q11.2 |
| Quick Links | Entrez ID:84440; OMIM: 611999; Uniprot ID:RFIP4_HUMAN; ENSEMBL ID: ENSG00000131242; HGNC ID: 30267 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.406788
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 5 / 62319 | 80 |  |
| fetus | 24 / 564012 | 42 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 90 / 1939121 | 46 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 17 / 114246 | 148 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 9 / 119369 | 75 | |
| germ cell tumor | 29 / 263845 | 109 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 9 / 136302 | 66 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 7 / 96359 | 72 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 6 / 97250 | 61 | |
| normal | 195 / 3360307 | 58 | |
| ovarian tumor | 17 / 76682 | 221 |  |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 9 / 125680 | 71 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 9 / 124949 | 72 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 1 / 29757 | 33 | |
| blood | 4 / 123478 | 32 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 69 / 1100989 | 62 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 10 / 215722 | 46 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 11 / 211054 | 52 | |
| heart | 0 / 89626 | 0 | |
| intestine | 24 / 234472 | 102 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 1 / 24145 | 41 | |
| liver | 8 / 207743 | 38 | |
| lung | 6 / 336974 | 17 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 11 / 91610 | 120 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 17 / 102051 | 166 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 25 / 280825 | 89 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 10 / 210574 | 47 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 6 / 96619 | 62 | |
| testis | 53 / 330442 | 160 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 7 / 47473 | 147 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
- Probe name: A_23_P38427
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.72 ± 0.57 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 10.07 ± 0.19 | |
| Basal Part of Pons | 10.23 ± 0.33 | |
| Cerebellar Cortex | 9.7 ± 0.19 | |
| Cerebellar Nuclei | 10.1 ± 0.39 | |
| Claustrum | 9.63 ± 0.62 | |
| Epithalamus | 9.3 ± 0.58 | |
| Frontal Lobe | 10.08 ± 0.39 | |
| Globus Pallidus | 10.13 ± 0.37 | |
| Hypothalamus | 9.39 ± 0.34 | |
| Insula | 10.23 ± 0.28 | |
| Limbic Lobe | 10.14 ± 0.32 | |
| Mesencephalon | 9.94 ± 0.45 | |
| Myelencephalon | 10.03 ± 0.42 | |
| Occipital Lobe | 10.03 ± 0.41 | |
| Parietal Lobe | 10.08 ± 0.38 | |
| Pontine Tegmentum | 10.04 ± 0.36 | |
| Striatum | 10.21 ± 0.37 | |
| Subthalamus | 10.13 ± 0.26 | |
| Temporal Lobe | 10.31 ± 0.3 | |
| Thalamus | 10.19 ± 0.27 | |
| White Matter | 10.34 ± 0.16 | |
Mouse Brain ISH 