Annotation Detail for ABLIM2
Basic Information Top
| Gene Symbol: | ABLIM2 ( DKFZp761F129,FLJ26534,FLJ39684,KIAA1808,MGC141918 ) |
|---|---|
| Gene Full Name: | actin binding LIM protein family, member 2 |
| Band: | 4p16.1 |
| Quick Links | Entrez ID:84448; OMIM: 612544; Uniprot ID:ABLM2_HUMAN; ENSEMBL ID: ENSG00000163995; HGNC ID: 19195 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.233404
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 12 / 564012 | 21 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 38 / 1939121 | 19 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 3 / 34366 | 87 |  |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 2 / 263845 | 7 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 75 / 3360307 | 22 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 22 / 104616 | 210 |  |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 37 / 1100989 | 33 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 7 / 211054 | 33 | |
| heart | 1 / 89626 | 11 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 14 / 336974 | 41 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 5 / 67052 | 74 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 30 / 214812 | 139 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: CUST_9610_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.16 ± 0.39 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.78 ± 0.51 | |
| Basal Part of Pons | 7.19 ± 0.24 | |
| Cerebellar Cortex | 6.07 ± 0.23 | |
| Cerebellar Nuclei | 6.56 ± 0.28 | |
| Claustrum | 7.16 ± 0.43 | |
| Epithalamus | 5.29 ± 0.82 | |
| Frontal Lobe | 6.34 ± 0.51 | |
| Globus Pallidus | 5.71 ± 0.6 | |
| Hypothalamus | 6.57 ± 0.74 | |
| Insula | 6.48 ± 0.44 | |
| Limbic Lobe | 6.42 ± 0.52 | |
| Mesencephalon | 6.49 ± 0.63 | |
| Myelencephalon | 6.57 ± 0.6 | |
| Occipital Lobe | 7.19 ± 0.52 | |
| Parietal Lobe | 6.8 ± 0.43 | |
| Pontine Tegmentum | 6.58 ± 0.47 | |
| Striatum | 7.74 ± 0.51 | |
| Subthalamus | 6.29 ± 0.73 | |
| Temporal Lobe | 6.56 ± 0.38 | |
| Thalamus | 6.61 ± 0.45 | |
| White Matter | 4.89 ± 0.56 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ablim2 | CB | Cerebellum | 36.08 | |
| 91.56 | | |||
| Ablim2 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Ablim2 | HIP | Hippocampal region | 91.22 | |
| 100 | | |||
| Ablim2 | HPF | Hippocampal formation | 95.13 | |
| 100 | | |||
| Ablim2 | HY | Hypothalamus | 61.74 | |
| 55.95 | | |||
| Ablim2 | LSX | Lateral septal complex | 45.5 | |
| 43.88 | | |||
| Ablim2 | MB | Midbrain | 80.23 | |
| 84.99 | | |||
| Ablim2 | MY | Medulla | 83.73 | |
| 100 | | |||
| Ablim2 | OLF | Olfactory bulb | 96.14 | |
| 100 | | |||
| Ablim2 | P | Pons | 78.1 | |
| 90.73 | | |||
| Ablim2 | PAL | Pallidum | 69.27 | |
| 72.61 | | |||
| Ablim2 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Ablim2 | sAMY | Striatum-like amygdalar nuclei | 97.27 | |
| 94.87 | | |||
| Ablim2 | STR | Striatum | 100 | |
| 100 | | |||
| Ablim2 | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Ablim2 | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Ablim2 | TH | Thalamus | 62.51 | |
| 59.05 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00069935 | 11 | 230 | 240 | HYHPSCALCVR | Peptide Atlas |