Annotation Detail for HIATL1
Basic Information Top
| Gene Symbol: | HIATL1 ( FLJ14753,MGC117350 ) |
|---|---|
| Gene Full Name: | hippocampus abundant transcript-like 1 |
| Band: | 9q22.32 |
| Quick Links | Entrez ID:84641; OMIM: NA; Uniprot ID:HIAL1_HUMAN; ENSEMBL ID: ENSG00000148110; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.727498
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 3 / 564012 | 5 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 74 / 1939121 | 38 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 7 / 114246 | 61 | |
| esophageal tumor | 2 / 17290 | 115 | |
| gastrointestinal tumor | 8 / 119369 | 67 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 7 / 106883 | 65 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 8 / 97250 | 82 | |
| normal | 85 / 3360307 | 25 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 13 / 90257 | 144 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 7 / 123478 | 56 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 5 / 48801 | 102 | |
| brain | 24 / 1100989 | 21 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 10 / 149255 | 66 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 7 / 211054 | 33 | |
| heart | 0 / 89626 | 0 | |
| intestine | 14 / 234472 | 59 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 1 / 24145 | 41 | |
| liver | 4 / 207743 | 19 | |
| lung | 7 / 336974 | 20 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 11 / 91610 | 120 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 3 / 20539 | 146 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 11 / 280825 | 39 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 9 / 210574 | 42 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 3 / 96619 | 31 | |
| testis | 13 / 330442 | 39 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 15 / 232878 | 64 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_32_P129772
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.4 ± 0.95 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.36 ± 0.5 | |
| Basal Part of Pons | 1.54 ± 0.44 | |
| Cerebellar Cortex | 2.12 ± 0.62 | |
| Cerebellar Nuclei | 2.2 ± 0.7 | |
| Claustrum | 2.63 ± 0.78 | |
| Epithalamus | 2.48 ± 0.57 | |
| Frontal Lobe | 2.03 ± 0.74 | |
| Globus Pallidus | 2.4 ± 0.67 | |
| Hypothalamus | 2.05 ± 0.67 | |
| Insula | 1.94 ± 0.48 | |
| Limbic Lobe | 2.01 ± 0.7 | |
| Mesencephalon | 2.3 ± 0.7 | |
| Myelencephalon | 2.15 ± 0.67 | |
| Occipital Lobe | 2.16 ± 0.7 | |
| Parietal Lobe | 2.15 ± 0.76 | |
| Pontine Tegmentum | 2.19 ± 0.69 | |
| Striatum | 1.92 ± 0.72 | |
| Subthalamus | 2.15 ± 0.7 | |
| Temporal Lobe | 2.11 ± 0.69 | |
| Thalamus | 2.17 ± 0.62 | |
| White Matter | 2.1 ± 0.91 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Hiatl1 | CB | Cerebellum | 26.57 | |
| 63.04 | | |||
| Hiatl1 | CTX | Cerebral cortex | 84.16 | |
| 68.77 | | |||
| Hiatl1 | HIP | Hippocampal region | 54.31 | |
| 79.38 | | |||
| Hiatl1 | HPF | Hippocampal formation | 64.24 | |
| 74.51 | | |||
| Hiatl1 | HY | Hypothalamus | 22.97 | |
| 20.58 | | |||
| Hiatl1 | LSX | Lateral septal complex | 11.14 | |
| 9.58 | | |||
| Hiatl1 | MB | Midbrain | 38.75 | |
| 38.91 | | |||
| Hiatl1 | MY | Medulla | 41.66 | |
| 47.2 | | |||
| Hiatl1 | OLF | Olfactory bulb | 54.43 | |
| 46.32 | | |||
| Hiatl1 | P | Pons | 48.36 | |
| 55.31 | | |||
| Hiatl1 | PAL | Pallidum | 30.83 | |
| 29.76 | | |||
| Hiatl1 | RHP | Retrohippocampal region | 85.66 | |
| 71.43 | | |||
| Hiatl1 | sAMY | Striatum-like amygdalar nuclei | 51.23 | |
| 44.09 | | |||
| Hiatl1 | STR | Striatum | 52.34 | |
| 41.1 | | |||
| Hiatl1 | STRd | Striatum dorsal region | 62.3 | |
| 49.17 | | |||
| Hiatl1 | STRv | Striatum ventral region | 43.63 | |
| 32.07 | | |||
| Hiatl1 | TH | Thalamus | 57.5 | |
| 55.24 | |