AutismKB 2.0

Annotation Detail for IL17RC


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Basic Information Top
Gene Symbol:IL17RC ( FLJ95963,FLJ96005,IL17-RL,IL17RL,MGC10763 )
Gene Full Name: interleukin 17 receptor C
Band: 3p25.3
Quick LinksEntrez ID:84818; OMIM: 610925; Uniprot ID:I17RC_HUMAN; ENSEMBL ID: ENSG00000163702; HGNC ID: 18358
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus24 / 56401242
neonate14 / 31097450
infant0 / 236200 
juvenile3 / 5555653
adult179 / 193912192
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor21 / 94178222
cervical tumor3 / 3436687
chondrosarcoma7 / 8282384
colorectal tumor2 / 11424617
esophageal tumor1 / 1729057
gastrointestinal tumor1 / 1193698
germ cell tumor7 / 26384526
glioma19 / 106883177
head and neck tumor3 / 13630222
kidney tumor2 / 6895929
leukemia1 / 9584210
liver tumor1 / 9635910
lung tumor6 / 10312758
lymphoma0 / 717550 
non-neoplasia13 / 97250133
normal301 / 336030789
ovarian tumor8 / 76682104
pancreatic tumor8 / 10461676
primitive neuroectodermal tumor of the CNS5 / 12568039
prostate cancer21 / 102680204
retinoblastoma1 / 4635621
skin tumor12 / 12494996
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor6 / 9025766
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland5 / 33197150
ascites0 / 400150 
bladder1 / 2975733
blood6 / 12347848
bone5 / 7165569
bone marrow1 / 4880120
brain82 / 110098974
cervix9 / 48171186
connective tissue11 / 14925573
ear0 / 162120 
embryonic tissue5 / 21572223
esophagus1 / 2020949
eye7 / 21105433
heart4 / 8962644
intestine19 / 23447281
kidney11 / 21177751
larynx1 / 2414541
liver4 / 20774319
lung22 / 33697465
lymph0 / 442700 
lymph node0 / 916100 
mammary gland23 / 153271150
mouth2 / 6705229
muscle0 / 1077150 
nerve2 / 15768126
ovary16 / 102051156
pancreas32 / 214812148
parathyroid5 / 20539243
pharynx0 / 413280 
pituitary gland2 / 16585120
placenta15 / 28082553
prostate66 / 189345348
salivary gland1 / 2015549
skin34 / 210574161
spleen9 / 53952166
stomach3 / 9661931
testis2 / 3304426
thymus6 / 8113173
thyroid3 / 4747363
tonsil0 / 169990 
trachea6 / 52413114
umbilical cord0 / 136800 
uterus25 / 232878107
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 221926_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.3
Adipocyte4.25
AdrenalCortex4.6
Adrenalgland3.7
Amygdala4.55
Appendix4.25
AtrioventricularNode3.35
BDCA4+_DentriticCells4.65
Bonemarrow4.25
BronchialEpithelialCells4.2
CD105+_Endothelial4.35
CD14+_Monocytes4.6
CD19+_BCells(neg._sel.)4.5
CD33+_Myeloid5.5
CD34+5.45
CD4+_Tcells4.55
CD56+_NKCells4.9
CD71+_EarlyErythroid4
CD8+_Tcells4
CardiacMyocytes5.7
Caudatenucleus3.8
Cerebellum3.45
CerebellumPeduncles4.85
CiliaryGanglion3.05
CingulateCortex4.4
Colorectaladenocarcinoma4.55
DorsalRootGanglion3.35
FetalThyroid4.15
Fetalbrain4.3
Fetalliver3.75
Fetallung3.6
GlobusPallidus3.15
Heart21.35
Hypothalamus4.65
Kidney3.55
Leukemia_chronicMyelogenousK-5623.9
Leukemia_promyelocytic-HL-603.8
Leukemialymphoblastic(MOLT-4)3.45
Liver11
Lung5.5
Lymphnode3.7
Lymphoma_burkitts(Daudi)5.45
Lymphoma_burkitts(Raji)6.05
MedullaOblongata3.9
OccipitalLobe3.85
OlfactoryBulb3.4
Ovary2.85
Pancreas3.5
PancreaticIslet4.6
ParietalLobe4.5
Pituitary5.45
Placenta4.45
Pons4.1
PrefrontalCortex5.25
Prostate10.2
Salivarygland3.45
SkeletalMuscle5.2
Skin3.3
SmoothMuscle4.9
Spinalcord4.55
SubthalamicNucleus3.9
SuperiorCervicalGanglion4.9
TemporalLobe3.9
Testis3.7
TestisGermCell3.6
TestisIntersitial3.6
TestisLeydigCell4.25
TestisSeminiferousTubule3.7
Thalamus4.35
Thymus3.4
Thyroid10.9
Tongue4.25
Tonsil4.15
Trachea3.65
TrigeminalGanglion4.5
Uterus3.55
UterusCorpus3.9
WholeBlood4.7
Wholebrain3.6
colon4.3
pineal_day5.28
pineal_night5.2
retina5.175
small_intestine4.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_8400_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.86 ± 0.79
Basal Forebrain2.59 ± 0.54
Basal Part of Pons2.6 ± 0.44
Cerebellar Cortex2.97 ± 0.62
Cerebellar Nuclei2.79 ± 0.72
Claustrum2.96 ± 0.68
Epithalamus2.66 ± 0.64
Frontal Lobe2.68 ± 0.72
Globus Pallidus3.37 ± 0.55
Hypothalamus2.52 ± 0.6
Insula2.79 ± 0.67
Limbic Lobe2.78 ± 0.56
Mesencephalon2.79 ± 0.67
Myelencephalon2.78 ± 0.62
Occipital Lobe3.13 ± 0.59
Parietal Lobe2.75 ± 0.68
Pontine Tegmentum2.73 ± 0.67
Striatum2.71 ± 0.55
Subthalamus2.81 ± 1.25
Temporal Lobe2.7 ± 0.62
Thalamus2.7 ± 0.64
White Matter2.73 ± 0.58
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Il17rcCBCerebellum2.89
2.41
Il17rcCTXCerebral cortex1.35
1.3
Il17rcHIPHippocampal region0.31
0.37
Il17rcHPFHippocampal formation0.95
1.14
Il17rcHYHypothalamus1.05
0.86
Il17rcLSXLateral septal complex0.09
0.08
Il17rcMBMidbrain0.75
0.75
Il17rcMYMedulla2.64
2.21
Il17rcOLFOlfactory bulb5.25
4.44
Il17rcPPons2.08
1.79
Il17rcPALPallidum0.2
0.18
Il17rcRHPRetrohippocampal region1.93
2.13
Il17rcsAMYStriatum-like amygdalar nuclei1.7
1.44
Il17rcSTRStriatum0.4
0.34
Il17rcSTRdStriatum dorsal region0.22
0.22
Il17rcSTRvStriatum ventral region0.57
0.3
Il17rcTHThalamus0.35
0.28
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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