AutismKB 2.0

Annotation Detail for GALR3


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Basic Information Top
Gene Symbol:GALR3 ( - )
Gene Full Name: galanin receptor 3
Band: 22q13.1
Quick LinksEntrez ID:8484; OMIM: 603692; Uniprot ID:GALR3_HUMAN; ENSEMBL ID: ENSG00000128310; HGNC ID: 4134
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult0 / 19391210 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal1 / 33603070 
ovarian tumor1 / 7668213
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain1 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye1 / 2110544
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary1 / 1020519
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 33579_i_at
Cell line Expression level Expression bar
721_B_lymphoblasts2.1
Adipocyte1.6
AdrenalCortex1.65
Adrenalgland1.35
Amygdala1.75
Appendix1.6
AtrioventricularNode1.2
BDCA4+_DentriticCells1.85
Bonemarrow1.6
BronchialEpithelialCells1.65
CD105+_Endothelial1.65
CD14+_Monocytes1.75
CD19+_BCells(neg._sel.)1.8
CD33+_Myeloid2.1
CD34+2.1
CD4+_Tcells1.8
CD56+_NKCells2
CD71+_EarlyErythroid1.5
CD8+_Tcells1.6
CardiacMyocytes2
Caudatenucleus1.45
Cerebellum1.3
CerebellumPeduncles1.85
CiliaryGanglion1.1
CingulateCortex1.65
Colorectaladenocarcinoma1.65
DorsalRootGanglion1.2
FetalThyroid1.55
Fetalbrain1.65
Fetalliver1.4
Fetallung1.4
GlobusPallidus1.2
Heart2
Hypothalamus1.8
Kidney1.3
Leukemia_chronicMyelogenousK-5621.5
Leukemia_promyelocytic-HL-601.45
Leukemialymphoblastic(MOLT-4)1.35
Liver2.1
Lung1.85
Lymphnode1.45
Lymphoma_burkitts(Daudi)2.05
Lymphoma_burkitts(Raji)2.2
MedullaOblongata1.5
OccipitalLobe1.5
OlfactoryBulb1.3
Ovary1.05
Pancreas1.3
PancreaticIslet1.75
ParietalLobe1.65
Pituitary1.95
Placenta1.7
Pons1.55
PrefrontalCortex2.1
Prostate1.95
Salivarygland1.3
SkeletalMuscle1.75
Skin1.2
SmoothMuscle1.85
Spinalcord1.75
SubthalamicNucleus1.45
SuperiorCervicalGanglion1.75
TemporalLobe1.5
Testis1.4
TestisGermCell1.4
TestisIntersitial1.35
TestisLeydigCell1.65
TestisSeminiferousTubule1.45
Thalamus1.65
Thymus1.35
Thyroid2.1
Tongue1.55
Tonsil1.6
Trachea1.4
TrigeminalGanglion1.55
Uterus1.35
UterusCorpus1.4
WholeBlood1.85
Wholebrain1.45
colon1.7
pineal_day2.02
pineal_night2
retina2.025
small_intestine1.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P256663
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala11.43 ± 0.68
Basal Forebrain11.21 ± 0.16
Basal Part of Pons11.51 ± 0.34
Cerebellar Cortex10.86 ± 0.49
Cerebellar Nuclei11.52 ± 0.27
Claustrum11.42 ± 0.38
Epithalamus10.65 ± 0.38
Frontal Lobe11.33 ± 0.55
Globus Pallidus11.54 ± 0.33
Hypothalamus11.32 ± 0.76
Insula11.18 ± 0.65
Limbic Lobe11.25 ± 0.56
Mesencephalon11.26 ± 0.47
Myelencephalon11.26 ± 0.54
Occipital Lobe11.14 ± 0.49
Parietal Lobe11.12 ± 0.46
Pontine Tegmentum11.04 ± 0.54
Striatum11.43 ± 0.54
Subthalamus11.12 ± 0.13
Temporal Lobe11.16 ± 0.57
Thalamus11.26 ± 0.45
White Matter11.46 ± 0.62
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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