Annotation Detail for C12orf34
Basic Information Top
| Gene Symbol: | C12orf34 ( FLJ14721 ) |
|---|---|
| Gene Full Name: | chromosome 12 open reading frame 34 |
| Band: | 12q24.11 |
| Quick Links | Entrez ID:84915; OMIM: NA; Uniprot ID:CL034_HUMAN; ENSEMBL ID: ENSG00000139438; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.661785
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 6 / 564012 | 10 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 26 / 1939121 | 13 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 10 / 106883 | 93 |  |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 42 / 3360307 | 12 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 11 / 125680 | 87 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 5 / 46356 | 107 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 28 / 1100989 | 25 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 14 / 211054 | 66 | |
| heart | 0 / 89626 | 0 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 11 / 336974 | 32 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 6 / 330442 | 18 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_150_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.24 ± 0.98 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.14 ± 1.14 | |
| Basal Part of Pons | 1.43 ± 0.4 | |
| Cerebellar Cortex | 1.65 ± 0.8 | |
| Cerebellar Nuclei | 2.02 ± 0.69 | |
| Claustrum | 2.64 ± 0.9 | |
| Epithalamus | 1.39 ± 0.6 | |
| Frontal Lobe | 1.58 ± 0.64 | |
| Globus Pallidus | 2.41 ± 0.47 | |
| Hypothalamus | 1.86 ± 0.68 | |
| Insula | 1.63 ± 0.69 | |
| Limbic Lobe | 1.72 ± 0.62 | |
| Mesencephalon | 1.88 ± 0.66 | |
| Myelencephalon | 1.77 ± 0.69 | |
| Occipital Lobe | 1.8 ± 0.7 | |
| Parietal Lobe | 1.81 ± 0.73 | |
| Pontine Tegmentum | 1.81 ± 0.68 | |
| Striatum | 1.96 ± 0.68 | |
| Subthalamus | 1.93 ± 0.68 | |
| Temporal Lobe | 1.61 ± 0.62 | |
| Thalamus | 1.7 ± 0.57 | |
| White Matter | 3.19 ± 0.8 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| BC057022 | CB | Cerebellum | 25.94 | |
| 68.91 | | |||
| BC057022 | CTX | Cerebral cortex | 11.58 | |
| 7.73 | | |||
| BC057022 | HIP | Hippocampal region | 7.34 | |
| 6.83 | | |||
| BC057022 | HPF | Hippocampal formation | 9.83 | |
| 8.35 | | |||
| BC057022 | HY | Hypothalamus | 4.1 | |
| 3 | | |||
| BC057022 | LSX | Lateral septal complex | 6.04 | |
| 4.04 | | |||
| BC057022 | MB | Midbrain | 7.67 | |
| 6.96 | | |||
| BC057022 | MY | Medulla | 11.58 | |
| 11.52 | | |||
| BC057022 | OLF | Olfactory bulb | 19.06 | |
| 14.35 | | |||
| BC057022 | P | Pons | 7.97 | |
| 7.63 | | |||
| BC057022 | PAL | Pallidum | 16.24 | |
| 13.99 | | |||
| BC057022 | RHP | Retrohippocampal region | 14.06 | |
| 10.48 | | |||
| BC057022 | sAMY | Striatum-like amygdalar nuclei | 11.06 | |
| 8.07 | | |||
| BC057022 | STR | Striatum | 21.56 | |
| 15.14 | | |||
| BC057022 | STRd | Striatum dorsal region | 25.65 | |
| 17.94 | | |||
| BC057022 | STRv | Striatum ventral region | 21.39 | |
| 15.26 | | |||
| BC057022 | TH | Thalamus | 25 | |
| 20.32 | |