Annotation Detail for LRP11
Basic Information Top
| Gene Symbol: | LRP11 ( FLJ14735,MANSC3,MGC39092,bA350J20.3 ) |
|---|---|
| Gene Full Name: | low density lipoprotein receptor-related protein 11 |
| Band: | 6q25.1 |
| Quick Links | Entrez ID:84918; OMIM: NA; Uniprot ID:LRP11_HUMAN; ENSEMBL ID: ENSG00000120256; HGNC ID: 16936 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.408355
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 22 / 564012 | 39 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 60 / 1939121 | 30 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 4 / 34366 | 116 |  |
| chondrosarcoma | 7 / 82823 | 84 | |
| colorectal tumor | 6 / 114246 | 52 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 74 / 3360307 | 22 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 14 / 1100989 | 12 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 9 / 149255 | 60 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 2 / 89626 | 22 | |
| intestine | 9 / 234472 | 38 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 44 / 336974 | 130 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 8 / 20539 | 389 |  |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_1842_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.82 ± 0.35 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.43 ± 0.44 | |
| Basal Part of Pons | 5.23 ± 0.22 | |
| Cerebellar Cortex | 4.45 ± 0.26 | |
| Cerebellar Nuclei | 4.59 ± 0.47 | |
| Claustrum | 4.71 ± 0.71 | |
| Epithalamus | 4.98 ± 0.45 | |
| Frontal Lobe | 4.83 ± 0.42 | |
| Globus Pallidus | 4.48 ± 0.47 | |
| Hypothalamus | 4.39 ± 0.6 | |
| Insula | 4.66 ± 0.4 | |
| Limbic Lobe | 4.83 ± 0.43 | |
| Mesencephalon | 4.65 ± 0.48 | |
| Myelencephalon | 4.73 ± 0.5 | |
| Occipital Lobe | 4.77 ± 0.36 | |
| Parietal Lobe | 4.75 ± 0.48 | |
| Pontine Tegmentum | 4.65 ± 0.42 | |
| Striatum | 4.67 ± 0.53 | |
| Subthalamus | 4.83 ± 0.49 | |
| Temporal Lobe | 4.81 ± 0.43 | |
| Thalamus | 4.56 ± 0.49 | |
| White Matter | 4.27 ± 0.99 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Lrp11 | CB | Cerebellum | 50.86 | |
| 100 | | |||
| Lrp11 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Lrp11 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Lrp11 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Lrp11 | HY | Hypothalamus | 100 | |
| 100 | | |||
| Lrp11 | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Lrp11 | MB | Midbrain | 100 | |
| 100 | | |||
| Lrp11 | MY | Medulla | 100 | |
| 100 | | |||
| Lrp11 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Lrp11 | P | Pons | 91.07 | |
| 100 | | |||
| Lrp11 | PAL | Pallidum | 100 | |
| 100 | | |||
| Lrp11 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Lrp11 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Lrp11 | STR | Striatum | 100 | |
| 100 | | |||
| Lrp11 | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Lrp11 | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Lrp11 | TH | Thalamus | 100 | |
| 100 | |