Annotation Detail for FAM104A
Basic Information Top
| Gene Symbol: | FAM104A ( FLJ14775 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 104, member A |
| Band: | 17q25.1 |
| Quick Links | Entrez ID:84923; OMIM: NA; Uniprot ID:F104A_HUMAN; ENSEMBL ID: ENSG00000133193; HGNC ID: 25918 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.103555
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 42 / 564012 | 74 |  |
| neonate | 2 / 31097 | 64 | |
| infant | 2 / 23620 | 84 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 68 / 1939121 | 35 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 10 / 82823 | 120 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 16 / 263845 | 60 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 12 / 136302 | 88 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 7 / 96359 | 72 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 6 / 97250 | 61 | |
| normal | 148 / 3360307 | 44 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 7 / 125680 | 55 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 1 / 29757 | 33 | |
| blood | 3 / 123478 | 24 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 64 / 1100989 | 58 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 11 / 149255 | 73 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 5 / 211054 | 23 | |
| heart | 4 / 89626 | 44 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 0 / 24145 | 0 | |
| liver | 8 / 207743 | 38 | |
| lung | 19 / 336974 | 56 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 12 / 67052 | 178 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 10 / 280825 | 35 | |
| prostate | 7 / 189345 | 36 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 7 / 210574 | 33 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 5 / 96619 | 51 | |
| testis | 46 / 330442 | 139 | |
| thymus | 5 / 81131 | 61 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 2 / 16999 | 117 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 4 / 51780 | 77 | |
Microarray in - Probe name: A_24_P91238
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.37 ± 0.25 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.1 ± 0.35 | |
| Basal Part of Pons | 6.33 ± 0.27 | |
| Cerebellar Cortex | 6.13 ± 0.25 | |
| Cerebellar Nuclei | 6.34 ± 0.38 | |
| Claustrum | 6.52 ± 0.54 | |
| Epithalamus | 5.94 ± 0.2 | |
| Frontal Lobe | 6.3 ± 0.39 | |
| Globus Pallidus | 6.88 ± 0.23 | |
| Hypothalamus | 6.09 ± 0.25 | |
| Insula | 6.24 ± 0.43 | |
| Limbic Lobe | 6.57 ± 0.37 | |
| Mesencephalon | 6.28 ± 0.45 | |
| Myelencephalon | 6.42 ± 0.42 | |
| Occipital Lobe | 6.42 ± 0.39 | |
| Parietal Lobe | 6.38 ± 0.37 | |
| Pontine Tegmentum | 6.33 ± 0.33 | |
| Striatum | 6.71 ± 0.35 | |
| Subthalamus | 6.39 ± 0.18 | |
| Temporal Lobe | 6.34 ± 0.34 | |
| Thalamus | 6.32 ± 0.35 | |
| White Matter | 6.61 ± 0.52 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| D11Wsu99e | CB | Cerebellum | 31.84 | |
| 40.27 | | |||
| D11Wsu99e | CTX | Cerebral cortex | 84.45 | |
| 71.41 | | |||
| D11Wsu99e | HIP | Hippocampal region | 72.41 | |
| 100 | | |||
| D11Wsu99e | HPF | Hippocampal formation | 65.54 | |
| 82.46 | | |||
| D11Wsu99e | HY | Hypothalamus | 28.1 | |
| 24.08 | | |||
| D11Wsu99e | LSX | Lateral septal complex | 29.45 | |
| 24.27 | | |||
| D11Wsu99e | MB | Midbrain | 42.01 | |
| 41.32 | | |||
| D11Wsu99e | MY | Medulla | 26.36 | |
| 27.55 | | |||
| D11Wsu99e | OLF | Olfactory bulb | 50.73 | |
| 43.9 | | |||
| D11Wsu99e | P | Pons | 37.05 | |
| 38.74 | | |||
| D11Wsu99e | PAL | Pallidum | 29.09 | |
| 27.57 | | |||
| D11Wsu99e | RHP | Retrohippocampal region | 54.89 | |
| 47.3 | | |||
| D11Wsu99e | sAMY | Striatum-like amygdalar nuclei | 28.65 | |
| 23.19 | | |||
| D11Wsu99e | STR | Striatum | 35.34 | |
| 27.67 | | |||
| D11Wsu99e | STRd | Striatum dorsal region | 36.36 | |
| 28.77 | | |||
| D11Wsu99e | STRv | Striatum ventral region | 35.74 | |
| 25.95 | | |||
| D11Wsu99e | TH | Thalamus | 68.65 | |
| 70.35 | |