AutismKB 2.0

Annotation Detail for TMEM209


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Basic Information Top
Gene Symbol:TMEM209 ( FLJ14803,NET31 )
Gene Full Name: transmembrane protein 209
Band: 7q32.2
Quick LinksEntrez ID:84928; OMIM: NA; Uniprot ID:TM209_HUMAN; ENSEMBL ID: ENSG00000146842; HGNC ID: 21898
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst3 / 6231948
fetus12 / 56401221
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult81 / 193912141
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor13 / 94178138
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor19 / 26384572
glioma2 / 10688318
head and neck tumor5 / 13630236
kidney tumor3 / 6895943
leukemia8 / 9584283
liver tumor4 / 9635941
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal72 / 336030721
ovarian tumor1 / 7668213
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer3 / 10268029
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites1 / 4001524
bladder3 / 29757100
blood6 / 12347848
bone0 / 716550 
bone marrow4 / 4880181
brain21 / 110098919
cervix0 / 481710 
connective tissue6 / 14925540
ear0 / 162120 
embryonic tissue6 / 21572227
esophagus0 / 202090 
eye0 / 2110540 
heart1 / 8962611
intestine2 / 2344728
kidney6 / 21177728
larynx1 / 2414541
liver7 / 20774333
lung5 / 33697414
lymph0 / 442700 
lymph node10 / 91610109
mammary gland13 / 15327184
mouth0 / 670520 
muscle3 / 10771527
nerve1 / 1576863
ovary1 / 1020519
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx5 / 41328120
pituitary gland0 / 165850 
placenta5 / 28082517
prostate4 / 18934521
salivary gland0 / 201550 
skin2 / 2105749
spleen0 / 539520 
stomach0 / 966190 
testis30 / 33044290
thymus1 / 8113112
thyroid2 / 4747342
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 222267_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.15
Adipocyte9.6
AdrenalCortex15.95
Adrenalgland8.8
Amygdala9.45
Appendix16.3
AtrioventricularNode15.4
BDCA4+_DentriticCells8.2
Bonemarrow11.05
BronchialEpithelialCells9.25
CD105+_Endothelial9.5
CD14+_Monocytes10.35
CD19+_BCells(neg._sel.)10.15
CD33+_Myeloid11.45
CD34+11.7
CD4+_Tcells8.55
CD56+_NKCells10.6
CD71+_EarlyErythroid9.1
CD8+_Tcells8.4
CardiacMyocytes12.25
Caudatenucleus9.15
Cerebellum8.15
CerebellumPeduncles11.8
CiliaryGanglion13.4
CingulateCortex15.6
Colorectaladenocarcinoma9.65
DorsalRootGanglion11.45
FetalThyroid9.5
Fetalbrain9.6
Fetalliver8.25
Fetallung6.95
GlobusPallidus11.05
Heart15.05
Hypothalamus9.5
Kidney9.55
Leukemia_chronicMyelogenousK-5629.9
Leukemia_promyelocytic-HL-608.25
Leukemialymphoblastic(MOLT-4)7.85
Liver14.9
Lung10.3
Lymphnode8.05
Lymphoma_burkitts(Daudi)12.3
Lymphoma_burkitts(Raji)12.65
MedullaOblongata8.85
OccipitalLobe8.75
OlfactoryBulb7.7
Ovary8
Pancreas7.8
PancreaticIslet9.95
ParietalLobe12.1
Pituitary11.9
Placenta8.65
Pons10.7
PrefrontalCortex12.05
Prostate10.9
Salivarygland10.3
SkeletalMuscle22.7
Skin11.75
SmoothMuscle9.75
Spinalcord9.9
SubthalamicNucleus12.85
SuperiorCervicalGanglion31.3
TemporalLobe9.75
Testis8.25
TestisGermCell8.1
TestisIntersitial8.45
TestisLeydigCell10.75
TestisSeminiferousTubule8.8
Thalamus9.8
Thymus7.65
Thyroid10.8
Tongue13.3
Tonsil9.9
Trachea8.05
TrigeminalGanglion17.45
Uterus7.35
UterusCorpus9
WholeBlood9.8
Wholebrain6.75
colon9.15
pineal_day11.12
pineal_night10.84
retina11.225
small_intestine7.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P112034
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.78 ± 0.92
Basal Forebrain3.18 ± 0.62
Basal Part of Pons3.36 ± 0.61
Cerebellar Cortex3.89 ± 0.37
Cerebellar Nuclei3.81 ± 0.52
Claustrum4.11 ± 0.5
Epithalamus3.27 ± 0.59
Frontal Lobe3.5 ± 0.56
Globus Pallidus3.41 ± 0.58
Hypothalamus3.44 ± 0.41
Insula3.39 ± 0.79
Limbic Lobe3.48 ± 0.63
Mesencephalon3.56 ± 0.7
Myelencephalon3.58 ± 0.57
Occipital Lobe3.48 ± 0.5
Parietal Lobe3.48 ± 0.72
Pontine Tegmentum3.48 ± 0.64
Striatum3.54 ± 0.65
Subthalamus3.8 ± 1.11
Temporal Lobe3.54 ± 0.56
Thalamus3.52 ± 0.53
White Matter4.61 ± 0.32
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00007371 16 297 312 SQAPCANKDEADLSSK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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