Annotation Detail for C8orf76
Basic Information Top
| Gene Symbol: | C8orf76 ( FLJ14825,MGC9784 ) |
|---|---|
| Gene Full Name: | chromosome 8 open reading frame 76 |
| Band: | 8q24.13 |
| Quick Links | Entrez ID:84933; OMIM: NA; Uniprot ID:CH076_HUMAN; ENSEMBL ID: ENSG00000189376; HGNC ID: 25924 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.521800
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 4 / 62319 | 64 |  |
| fetus | 23 / 564012 | 40 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 45 / 1939121 | 23 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 1 / 96359 | 10 |  |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 87 / 3360307 | 25 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 4 / 123478 | 32 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 10 / 1100989 | 9 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 10 / 211054 | 47 | |
| heart | 5 / 89626 | 55 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 0 / 24145 | 0 | |
| liver | 7 / 207743 | 33 | |
| lung | 10 / 336974 | 29 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 11 / 280825 | 39 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 8 / 210574 | 37 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 5 / 96619 | 51 | |
| testis | 1 / 330442 | 3 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_2286_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.31 ± 0.52 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.28 ± 0.17 | |
| Basal Part of Pons | 6.39 ± 0.46 | |
| Cerebellar Cortex | 6.83 ± 0.22 | |
| Cerebellar Nuclei | 6.39 ± 0.43 | |
| Claustrum | 6.23 ± 0.59 | |
| Epithalamus | 6.8 ± 0.51 | |
| Frontal Lobe | 6.64 ± 0.31 | |
| Globus Pallidus | 6.02 ± 0.39 | |
| Hypothalamus | 6.45 ± 0.34 | |
| Insula | 6.64 ± 0.3 | |
| Limbic Lobe | 6.56 ± 0.41 | |
| Mesencephalon | 6.56 ± 0.4 | |
| Myelencephalon | 6.48 ± 0.43 | |
| Occipital Lobe | 6.16 ± 0.31 | |
| Parietal Lobe | 6.48 ± 0.37 | |
| Pontine Tegmentum | 6.55 ± 0.4 | |
| Striatum | 6.37 ± 0.35 | |
| Subthalamus | 6.31 ± 0.97 | |
| Temporal Lobe | 6.59 ± 0.34 | |
| Thalamus | 6.39 ± 0.29 | |
| White Matter | 6.07 ± 0.29 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 9130401M01Rik | CB | Cerebellum | 5.57 | |
| 6.57 | | |||
| 9130401M01Rik | CTX | Cerebral cortex | 1.02 | |
| 0.94 | | |||
| 9130401M01Rik | HIP | Hippocampal region | 1.5 | |
| 2.04 | | |||
| 9130401M01Rik | HPF | Hippocampal formation | 1.39 | |
| 1.68 | | |||
| 9130401M01Rik | HY | Hypothalamus | 0.19 | |
| 0.25 | | |||
| 9130401M01Rik | LSX | Lateral septal complex | 0.05 | |
| 0 | | |||
| 9130401M01Rik | MB | Midbrain | 1.98 | |
| 3.06 | | |||
| 9130401M01Rik | MY | Medulla | 0.95 | |
| 0.97 | | |||
| 9130401M01Rik | OLF | Olfactory bulb | 2.51 | |
| 1.95 | | |||
| 9130401M01Rik | P | Pons | 0.26 | |
| 0.47 | | |||
| 9130401M01Rik | PAL | Pallidum | 0.12 | |
| 0.1 | | |||
| 9130401M01Rik | RHP | Retrohippocampal region | 1.22 | |
| 1.22 | | |||
| 9130401M01Rik | sAMY | Striatum-like amygdalar nuclei | 0.13 | |
| 0.18 | | |||
| 9130401M01Rik | STR | Striatum | 0.27 | |
| 0.27 | | |||
| 9130401M01Rik | STRd | Striatum dorsal region | 0.31 | |
| 0.3 | | |||
| 9130401M01Rik | STRv | Striatum ventral region | 0.21 | |
| 0.23 | | |||
| 9130401M01Rik | TH | Thalamus | 1.18 | |
| 2.01 | |