Annotation Detail for FBXL20
Basic Information Top
| Gene Symbol: | FBXL20 ( DKFZp564O2364,FLJ21037,Fbl2,Fbl20,MGC15482 ) |
|---|---|
| Gene Full Name: | F-box and leucine-rich repeat protein 20 |
| Band: | 17q12 |
| Quick Links | Entrez ID:84961; OMIM: 609086; Uniprot ID:FXL20_HUMAN; ENSEMBL ID: ENSG00000108306; HGNC ID: 24679 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.462946
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 26 / 564012 | 46 | |
| neonate | 2 / 31097 | 64 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 228 / 1939121 | 117 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 139 / 94178 | 1475 |  |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 14 / 114246 | 122 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 2 / 263845 | 7 |  |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 29 / 136302 | 212 |  |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 4 / 103127 | 38 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 91 / 3360307 | 27 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 8 / 123478 | 64 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 25 / 1100989 | 22 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 10 / 211054 | 47 | |
| heart | 2 / 89626 | 22 | |
| intestine | 15 / 234472 | 63 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 2 / 24145 | 82 | |
| liver | 3 / 207743 | 14 | |
| lung | 16 / 336974 | 47 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 140 / 153271 | 913 | |
| mouth | 26 / 67052 | 387 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 6 / 280825 | 21 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 4 / 210574 | 18 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 4 / 96619 | 41 | |
| testis | 5 / 330442 | 15 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 1 / 51780 | 19 | |
- Probe name: CUST_11546_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.56 ± 0.72 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.42 ± 0.33 | |
| Basal Part of Pons | 4.53 ± 0.59 | |
| Cerebellar Cortex | 4.92 ± 0.34 | |
| Cerebellar Nuclei | 4.22 ± 0.55 | |
| Claustrum | 4.51 ± 0.77 | |
| Epithalamus | 4.4 ± 0.35 | |
| Frontal Lobe | 4.59 ± 0.45 | |
| Globus Pallidus | 3.48 ± 0.6 | |
| Hypothalamus | 4.52 ± 1.33 | |
| Insula | 4.57 ± 0.42 | |
| Limbic Lobe | 4.57 ± 0.47 | |
| Mesencephalon | 4.57 ± 0.58 | |
| Myelencephalon | 4.48 ± 0.54 | |
| Occipital Lobe | 4.58 ± 0.56 | |
| Parietal Lobe | 4.64 ± 0.44 | |
| Pontine Tegmentum | 4.6 ± 0.57 | |
| Striatum | 4.11 ± 0.59 | |
| Subthalamus | 4.49 ± 0.37 | |
| Temporal Lobe | 4.66 ± 0.52 | |
| Thalamus | 4.48 ± 0.52 | |
| White Matter | 3.15 ± 1.04 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| FXL20_HUMAN_275 | 8 | 275 | 282 | LRILEVAR | PRIDE |