Annotation Detail for FAM83A
Basic Information Top
| Gene Symbol: | FAM83A ( BJ-TSA-9,MGC14128 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 83, member A |
| Band: | 8q24.13 |
| Quick Links | Entrez ID:84985; OMIM: NA; Uniprot ID:FA83A_HUMAN; ENSEMBL ID: ENSG00000147689; HGNC ID: 28210 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.379821
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 0 / 564012 | 0 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 47 / 1939121 | 24 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 3 / 17475 | 171 |  |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 5 / 34366 | 145 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 108 / 136302 | 792 |  |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 21 / 103127 | 203 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 22 / 3360307 | 6 |  |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 6 / 104616 | 57 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 14 / 102680 | 136 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 2 / 29757 | 67 | |
| blood | 0 / 123478 | 0 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 4 / 1100989 | 3 | |
| cervix | 5 / 48171 | 103 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 12 / 211054 | 56 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 10 / 24145 | 414 | |
| liver | 0 / 207743 | 0 | |
| lung | 25 / 336974 | 74 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 99 / 67052 | 1476 |  |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 17 / 189345 | 89 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P216052
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 1.92 ± 1.07 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.53 ± 0.36 | |
| Basal Part of Pons | 1.4 ± 0.76 | |
| Cerebellar Cortex | 1.32 ± 0.71 | |
| Cerebellar Nuclei | 2.05 ± 0.86 | |
| Claustrum | 2.45 ± 0.97 | |
| Epithalamus | 1.2 ± 0.86 | |
| Frontal Lobe | 1.52 ± 0.79 | |
| Globus Pallidus | 2.1 ± 0.6 | |
| Hypothalamus | 1.61 ± 0.77 | |
| Insula | 1.24 ± 0.4 | |
| Limbic Lobe | 1.62 ± 0.88 | |
| Mesencephalon | 1.59 ± 0.77 | |
| Myelencephalon | 1.62 ± 0.78 | |
| Occipital Lobe | 1.6 ± 0.8 | |
| Parietal Lobe | 1.52 ± 0.92 | |
| Pontine Tegmentum | 1.65 ± 0.81 | |
| Striatum | 1.72 ± 0.78 | |
| Subthalamus | 1.67 ± 0.76 | |
| Temporal Lobe | 1.49 ± 0.85 | |
| Thalamus | 1.46 ± 0.72 | |
| White Matter | 1.87 ± 0.49 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| BC030396 | CB | Cerebellum | 11.09 | |
| 12.05 | | |||
| BC030396 | CTX | Cerebral cortex | 5.36 | |
| 3.59 | | |||
| BC030396 | HIP | Hippocampal region | 5.51 | |
| 4.87 | | |||
| BC030396 | HPF | Hippocampal formation | 5.18 | |
| 4.19 | | |||
| BC030396 | HY | Hypothalamus | 0.24 | |
| 0.31 | | |||
| BC030396 | LSX | Lateral septal complex | 1.08 | |
| 1.02 | | |||
| BC030396 | MB | Midbrain | 0.68 | |
| 0.79 | | |||
| BC030396 | MY | Medulla | 2.41 | |
| 2.26 | | |||
| BC030396 | OLF | Olfactory bulb | 4.72 | |
| 3.14 | | |||
| BC030396 | P | Pons | 0.91 | |
| 1.34 | | |||
| BC030396 | PAL | Pallidum | 0.54 | |
| 0.4 | | |||
| BC030396 | RHP | Retrohippocampal region | 4.89 | |
| 3.44 | | |||
| BC030396 | sAMY | Striatum-like amygdalar nuclei | 0.55 | |
| 0.51 | | |||
| BC030396 | STR | Striatum | 0.95 | |
| 0.79 | | |||
| BC030396 | STRd | Striatum dorsal region | 0.98 | |
| 0.84 | | |||
| BC030396 | STRv | Striatum ventral region | 0.92 | |
| 0.68 | | |||
| BC030396 | TH | Thalamus | 1.27 | |
| 1.51 | |