AutismKB 2.0

Annotation Detail for FAM86B1


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Basic Information Top
Gene Symbol:FAM86B1 ( MGC104828,MGC16279 )
Gene Full Name: family with sequence similarity 86, member B1
Band: 8p23.1
Quick LinksEntrez ID:85002; OMIM: NA; Uniprot ID:F86B1_HUMAN; ENSEMBL ID: ENSG00000186523; HGNC ID: 28268
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus4 / 5640127
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult16 / 19391218
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor2 / 2638457
glioma3 / 10688328
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor1 / 9635910
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal13 / 33603073
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS4 / 12568031
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor2 / 12494916
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder1 / 2975733
blood1 / 1234788
bone2 / 7165527
bone marrow1 / 4880120
brain8 / 11009897
cervix2 / 4817141
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine1 / 2344724
kidney0 / 2117770 
larynx0 / 241450 
liver1 / 2077434
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland2 / 15327113
mouth0 / 670520 
muscle0 / 1077150 
nerve1 / 1576863
ovary1 / 1020519
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate1 / 1893455
salivary gland0 / 201550 
skin2 / 2105749
spleen0 / 539520 
stomach0 / 966190 
testis1 / 3304423
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 65585_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.7
Adipocyte10.35
AdrenalCortex6.65
Adrenalgland9.3
Amygdala7.05
Appendix8.5
AtrioventricularNode5.05
BDCA4+_DentriticCells5
Bonemarrow6.55
BronchialEpithelialCells5.45
CD105+_Endothelial6.7
CD14+_Monocytes3.45
CD19+_BCells(neg._sel.)6.2
CD33+_Myeloid6.6
CD34+10.7
CD4+_Tcells6.2
CD56+_NKCells5.1
CD71+_EarlyErythroid5.55
CD8+_Tcells3.5
CardiacMyocytes6.3
Caudatenucleus6.25
Cerebellum5.75
CerebellumPeduncles7.5
CiliaryGanglion4.5
CingulateCortex6.85
Colorectaladenocarcinoma10.1
DorsalRootGanglion5.1
FetalThyroid8.65
Fetalbrain6.35
Fetalliver6.15
Fetallung5.5
GlobusPallidus5.25
Heart10.25
Hypothalamus7.2
Kidney27.05
Leukemia_chronicMyelogenousK-5626.1
Leukemia_promyelocytic-HL-6020.4
Leukemialymphoblastic(MOLT-4)5.45
Liver15.35
Lung10.15
Lymphnode5.65
Lymphoma_burkitts(Daudi)12.85
Lymphoma_burkitts(Raji)11.6
MedullaOblongata10
OccipitalLobe5.2
OlfactoryBulb6.65
Ovary4.45
Pancreas5.25
PancreaticIslet6.55
ParietalLobe7.8
Pituitary14.25
Placenta6.9
Pons6.8
PrefrontalCortex8.4
Prostate9.5
Salivarygland5.35
SkeletalMuscle51.9
Skin5.7
SmoothMuscle7.15
Spinalcord7.2
SubthalamicNucleus6.1
SuperiorCervicalGanglion16.5
TemporalLobe10.1
Testis7.4
TestisGermCell5.65
TestisIntersitial11.15
TestisLeydigCell6.55
TestisSeminiferousTubule5.95
Thalamus8.5
Thymus6.1
Thyroid19.65
Tongue6.5
Tonsil6.4
Trachea5.5
TrigeminalGanglion6.7
Uterus5.35
UterusCorpus16.6
WholeBlood6.4
Wholebrain6.3
colon6.45
pineal_day16.06
pineal_night11.02
retina11.2
small_intestine5.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_86_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.3 ± 0.48
Basal Forebrain6.57 ± 0.24
Basal Part of Pons6.6 ± 0.21
Cerebellar Cortex6.31 ± 0.23
Cerebellar Nuclei6.01 ± 0.43
Claustrum6.16 ± 0.48
Epithalamus6.85 ± 0.44
Frontal Lobe6.48 ± 0.29
Globus Pallidus6.19 ± 0.32
Hypothalamus6.44 ± 0.26
Insula6.39 ± 0.26
Limbic Lobe6.5 ± 0.26
Mesencephalon6.28 ± 0.32
Myelencephalon6.4 ± 0.41
Occipital Lobe6.18 ± 0.31
Parietal Lobe6.33 ± 0.29
Pontine Tegmentum6.34 ± 0.33
Striatum6.64 ± 0.33
Subthalamus6.19 ± 0.36
Temporal Lobe6.45 ± 0.29
Thalamus6.43 ± 0.29
White Matter5.91 ± 0.21
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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