Annotation Detail for C5orf62
Basic Information Top
| Gene Symbol: | C5orf62 ( MGC117221,MGC126887,MGC126889,MST150,NID67 ) |
|---|---|
| Gene Full Name: | chromosome 5 open reading frame 62 |
| Band: | 5q33.1 |
| Quick Links | Entrez ID:85027; OMIM: 608324; Uniprot ID:NID67_HUMAN; ENSEMBL ID: ENSG00000181368; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.29444
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 11 / 564012 | 19 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 69 / 1939121 | 35 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 6 / 114246 | 52 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 9 / 68959 | 130 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 119 / 3360307 | 35 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 10 / 125680 | 79 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 6 / 13106 | 457 |  |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 9 / 123478 | 72 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 23 / 1100989 | 20 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 10 / 211054 | 47 | |
| heart | 7 / 89626 | 78 | |
| intestine | 13 / 234472 | 55 | |
| kidney | 11 / 211777 | 51 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 10 / 336974 | 29 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 3 / 20539 | 146 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 20 / 280825 | 71 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 16 / 210574 | 75 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 1 / 96619 | 10 | |
| testis | 0 / 330442 | 0 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 1 / 51780 | 19 | |
- Probe name: CUST_1856_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.85 ± 0.73 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.92 ± 0.51 | |
| Basal Part of Pons | 3.85 ± 0.28 | |
| Cerebellar Cortex | 3.54 ± 0.38 | |
| Cerebellar Nuclei | 3.78 ± 0.47 | |
| Claustrum | 3.93 ± 0.94 | |
| Epithalamus | 3.5 ± 0.48 | |
| Frontal Lobe | 3.79 ± 0.49 | |
| Globus Pallidus | 4.47 ± 0.43 | |
| Hypothalamus | 3.38 ± 0.55 | |
| Insula | 3.43 ± 0.46 | |
| Limbic Lobe | 3.71 ± 0.58 | |
| Mesencephalon | 3.77 ± 0.62 | |
| Myelencephalon | 3.88 ± 0.59 | |
| Occipital Lobe | 3.84 ± 0.65 | |
| Parietal Lobe | 3.73 ± 0.58 | |
| Pontine Tegmentum | 3.81 ± 0.57 | |
| Striatum | 4.1 ± 0.63 | |
| Subthalamus | 3.89 ± 0.31 | |
| Temporal Lobe | 3.69 ± 0.61 | |
| Thalamus | 4 ± 0.52 | |
| White Matter | 3.38 ± 0.23 | |
Mouse Brain ISH 