Annotation Detail for PPIL4
Basic Information Top
| Gene Symbol: | PPIL4 ( HDCME13P ) |
|---|---|
| Gene Full Name: | peptidylprolyl isomerase (cyclophilin)-like 4 |
| Band: | 6q25.1 |
| Quick Links | Entrez ID:85313; OMIM: 607609; Uniprot ID:PPIL4_HUMAN; ENSEMBL ID: ENSG00000131013; HGNC ID: 15702 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.726494
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 6 / 564012 | 10 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 48 / 1939121 | 24 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 7 / 114246 | 61 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 84 / 3360307 | 24 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 19 / 1100989 | 17 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 9 / 215722 | 41 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 6 / 211054 | 28 | |
| heart | 4 / 89626 | 44 | |
| intestine | 11 / 234472 | 46 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 1 / 24145 | 41 | |
| liver | 6 / 207743 | 28 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 6 / 41328 | 145 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 5 / 96619 | 51 | |
| testis | 6 / 330442 | 18 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: CUST_7683_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.95 ± 0.32 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.64 ± 0.21 | |
| Basal Part of Pons | 7.28 ± 0.25 | |
| Cerebellar Cortex | 7.45 ± 0.3 | |
| Cerebellar Nuclei | 7.16 ± 0.12 | |
| Claustrum | 7.89 ± 0.32 | |
| Epithalamus | 7.96 ± 0.34 | |
| Frontal Lobe | 7.49 ± 0.32 | |
| Globus Pallidus | 7.8 ± 0.2 | |
| Hypothalamus | 7.68 ± 0.2 | |
| Insula | 7.66 ± 0.32 | |
| Limbic Lobe | 7.69 ± 0.32 | |
| Mesencephalon | 7.62 ± 0.33 | |
| Myelencephalon | 7.54 ± 0.35 | |
| Occipital Lobe | 7.61 ± 0.3 | |
| Parietal Lobe | 7.55 ± 0.34 | |
| Pontine Tegmentum | 7.57 ± 0.37 | |
| Striatum | 7.79 ± 0.26 | |
| Subthalamus | 7.61 ± 0.21 | |
| Temporal Lobe | 7.53 ± 0.33 | |
| Thalamus | 7.33 ± 0.26 | |
| White Matter | 8.12 ± 0.1 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ppil4 | CB | Cerebellum | 2.93 | |
| 3.31 | | |||
| Ppil4 | CTX | Cerebral cortex | 1.71 | |
| 1.31 | | |||
| Ppil4 | HIP | Hippocampal region | 3.03 | |
| 3.34 | | |||
| Ppil4 | HPF | Hippocampal formation | 2.69 | |
| 2.53 | | |||
| Ppil4 | HY | Hypothalamus | 0.2 | |
| 0.2 | | |||
| Ppil4 | LSX | Lateral septal complex | 0.09 | |
| 0.1 | | |||
| Ppil4 | MB | Midbrain | 1.73 | |
| 2.48 | | |||
| Ppil4 | MY | Medulla | 1.4 | |
| 1.89 | | |||
| Ppil4 | OLF | Olfactory bulb | 3.89 | |
| 3.8 | | |||
| Ppil4 | P | Pons | 0.82 | |
| 0.82 | | |||
| Ppil4 | PAL | Pallidum | 0.17 | |
| 0.14 | | |||
| Ppil4 | RHP | Retrohippocampal region | 2.3 | |
| 1.7 | | |||
| Ppil4 | sAMY | Striatum-like amygdalar nuclei | 0.23 | |
| 0.33 | | |||
| Ppil4 | STR | Striatum | 1.62 | |
| 1.53 | | |||
| Ppil4 | STRd | Striatum dorsal region | 2.19 | |
| 2.19 | | |||
| Ppil4 | STRv | Striatum ventral region | 1.25 | |
| 0.84 | | |||
| Ppil4 | TH | Thalamus | 0.64 | |
| 0.63 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00003900 | 14 | 34 | 47 | IKYYNYCLIHNVQR | Peptide Atlas |