AutismKB 2.0

Annotation Detail for BCAS1


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Basic Information Top
Gene Symbol:BCAS1 ( AIBC1,NABC1 )
Gene Full Name: breast carcinoma amplified sequence 1
Band: 20q13.2
Quick LinksEntrez ID:8537; OMIM: 602968; Uniprot ID:BCAS1_HUMAN; ENSEMBL ID: ENSG00000064787; HGNC ID: 974
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204378_at
Cell line Expression level Expression bar
721_B_lymphoblasts16.55
Adipocyte15.6
AdrenalCortex20
Adrenalgland14.5
Amygdala227.05
Appendix17.35
AtrioventricularNode97.2
BDCA4+_DentriticCells9.7
Bonemarrow19.6
BronchialEpithelialCells9.8
CD105+_Endothelial15.95
CD14+_Monocytes14.8
CD19+_BCells(neg._sel.)13.55
CD33+_Myeloid15.65
CD34+23
CD4+_Tcells13.2
CD56+_NKCells14.05
CD71+_EarlyErythroid22.6
CD8+_Tcells13.9
CardiacMyocytes21.45
Caudatenucleus83.4
Cerebellum29.15
CerebellumPeduncles102.8
CiliaryGanglion30.1
CingulateCortex223.65
Colorectaladenocarcinoma13.7
DorsalRootGanglion88.5
FetalThyroid15.7
Fetalbrain14.25
Fetalliver13.35
Fetallung7.85
GlobusPallidus136.95
Heart31.45
Hypothalamus384.25
Kidney15.6
Leukemia_chronicMyelogenousK-56213.8
Leukemia_promyelocytic-HL-6012
Leukemialymphoblastic(MOLT-4)11.8
Liver28.3
Lung13.1
Lymphnode8.9
Lymphoma_burkitts(Daudi)20
Lymphoma_burkitts(Raji)26.45
MedullaOblongata128.2
OccipitalLobe139.8
OlfactoryBulb348.25
Ovary10.8
Pancreas12.65
PancreaticIslet12.85
ParietalLobe175.25
Pituitary17.7
Placenta13.85
Pons106.75
PrefrontalCortex272
Prostate26.45
Salivarygland13.35
SkeletalMuscle18.55
Skin17.4
SmoothMuscle17.55
Spinalcord245.3
SubthalamicNucleus170
SuperiorCervicalGanglion35.15
TemporalLobe68.6
Testis13.4
TestisGermCell12
TestisIntersitial13.75
TestisLeydigCell17.3
TestisSeminiferousTubule13.85
Thalamus245.55
Thymus8.4
Thyroid12.7
Tongue18.9
Tonsil14.15
Trachea27.55
TrigeminalGanglion32.6
Uterus11.75
UterusCorpus14.45
WholeBlood11.3
Wholebrain82.55
colon74.05
pineal_day33.72
pineal_night25.04
retina132.925
small_intestine14.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5881_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.47 ± 0.58
Basal Forebrain6.4 ± 0.53
Basal Part of Pons5.54 ± 0.55
Cerebellar Cortex4.93 ± 0.48
Cerebellar Nuclei7.01 ± 0.52
Claustrum6.24 ± 0.55
Epithalamus4.82 ± 1.06
Frontal Lobe5.37 ± 0.9
Globus Pallidus7.81 ± 0.3
Hypothalamus5.38 ± 0.72
Insula5 ± 0.53
Limbic Lobe5.27 ± 0.95
Mesencephalon6.07 ± 0.87
Myelencephalon5.76 ± 0.89
Occipital Lobe5.87 ± 0.73
Parietal Lobe5.62 ± 0.77
Pontine Tegmentum5.84 ± 0.77
Striatum6.82 ± 0.76
Subthalamus6.4 ± 0.48
Temporal Lobe5.39 ± 0.7
Thalamus6.1 ± 0.52
White Matter8.17 ± 0.75
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00067978 18 342 359 GCNPSGHTQSVTTPEPAK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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