Annotation Detail for KIAA1671
Basic Information Top
| Gene Symbol: | KIAA1671 ( - ) |
|---|---|
| Gene Full Name: | KIAA1671 |
| Band: | 22q11.23 |
| Quick Links | Entrez ID:85379; OMIM: NA; Uniprot ID:K1671_HUMAN; ENSEMBL ID: ENSG00000197077; HGNC ID: 29345 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.419171
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 14 / 564012 | 24 | |
| neonate | 2 / 31097 | 64 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 68 / 1939121 | 35 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 3 / 34366 | 87 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 6 / 114246 | 52 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 1 / 263845 | 3 |  |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 7 / 136302 | 51 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 87 / 3360307 | 25 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 6 / 104616 | 57 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 7 / 90257 | 77 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 24 / 1100989 | 21 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 4 / 211054 | 18 | |
| heart | 3 / 89626 | 33 | |
| intestine | 8 / 234472 | 34 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 7 / 67052 | 104 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 8 / 189345 | 42 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 3 / 330442 | 9 | |
| thymus | 7 / 81131 | 86 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 4 / 52413 | 76 | |
| umbilical cord | 4 / 13680 | 292 |  |
| uterus | 12 / 232878 | 51 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: A_24_P678741
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.49 ± 0.39 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.69 ± 0.26 | |
| Basal Part of Pons | 4.89 ± 0.47 | |
| Cerebellar Cortex | 5.19 ± 0.43 | |
| Cerebellar Nuclei | 5.34 ± 0.36 | |
| Claustrum | 5.61 ± 0.56 | |
| Epithalamus | 6.51 ± 0.71 | |
| Frontal Lobe | 5.69 ± 0.59 | |
| Globus Pallidus | 6.73 ± 0.31 | |
| Hypothalamus | 5.45 ± 0.39 | |
| Insula | 5.55 ± 0.53 | |
| Limbic Lobe | 5.86 ± 0.72 | |
| Mesencephalon | 5.67 ± 0.54 | |
| Myelencephalon | 5.72 ± 0.62 | |
| Occipital Lobe | 5.93 ± 0.61 | |
| Parietal Lobe | 5.74 ± 0.43 | |
| Pontine Tegmentum | 5.74 ± 0.4 | |
| Striatum | 5.71 ± 0.48 | |
| Subthalamus | 5.53 ± 0.55 | |
| Temporal Lobe | 5.55 ± 0.45 | |
| Thalamus | 5.68 ± 0.4 | |
| White Matter | 4.76 ± 0.66 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2900026A02Rik | CB | Cerebellum | 8.07 | |
| 10.54 | | |||
| 2900026A02Rik | CTX | Cerebral cortex | 26.86 | |
| 19.44 | | |||
| 2900026A02Rik | HIP | Hippocampal region | 30.88 | |
| 56.45 | | |||
| 2900026A02Rik | HPF | Hippocampal formation | 31.65 | |
| 42.77 | | |||
| 2900026A02Rik | HY | Hypothalamus | 4.15 | |
| 3.02 | | |||
| 2900026A02Rik | LSX | Lateral septal complex | 4.39 | |
| 3.08 | | |||
| 2900026A02Rik | MB | Midbrain | 2.99 | |
| 2.75 | | |||
| 2900026A02Rik | MY | Medulla | 6.94 | |
| 6.84 | | |||
| 2900026A02Rik | OLF | Olfactory bulb | 17.24 | |
| 12.87 | | |||
| 2900026A02Rik | P | Pons | 5.52 | |
| 5.21 | | |||
| 2900026A02Rik | PAL | Pallidum | 3.81 | |
| 3.06 | | |||
| 2900026A02Rik | RHP | Retrohippocampal region | 34.85 | |
| 28.7 | | |||
| 2900026A02Rik | sAMY | Striatum-like amygdalar nuclei | 2.85 | |
| 2.28 | | |||
| 2900026A02Rik | STR | Striatum | 5.29 | |
| 3.96 | | |||
| 2900026A02Rik | STRd | Striatum dorsal region | 4.25 | |
| 3.3 | | |||
| 2900026A02Rik | STRv | Striatum ventral region | 10.25 | |
| 6.86 | | |||
| 2900026A02Rik | TH | Thalamus | 5.74 | |
| 4.64 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00005346 | 24 | 1572 | 1595 | LSSLSSQTEPTSAGDQYDCSRDQR | Peptide Atlas |