Annotation Detail for EAF1
Basic Information Top
| Gene Symbol: | EAF1 ( - ) |
|---|---|
| Gene Full Name: | ELL associated factor 1 |
| Band: | 3p25.1 |
| Quick Links | Entrez ID:85403; OMIM: 608315; Uniprot ID:EAF1_HUMAN; ENSEMBL ID: ENSG00000144597; HGNC ID: 20907 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.716733
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 3 / 62319 | 48 | |
| fetus | 10 / 564012 | 17 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 73 / 1939121 | 37 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 10 / 94178 | 106 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 14 / 263845 | 53 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 1 / 103127 | 9 |  |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 89 / 3360307 | 26 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 0 / 29757 | 0 | |
| blood | 4 / 123478 | 32 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 26 / 1100989 | 23 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 0 / 89626 | 0 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 6 / 207743 | 28 | |
| lung | 9 / 336974 | 26 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 9 / 91610 | 98 | |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 7 / 210574 | 33 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 23 / 330442 | 69 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P166742
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.3 ± 0.36 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.38 ± 0.16 | |
| Basal Part of Pons | 6.45 ± 0.33 | |
| Cerebellar Cortex | 6.22 ± 0.27 | |
| Cerebellar Nuclei | 6.44 ± 0.32 | |
| Claustrum | 6.12 ± 0.49 | |
| Epithalamus | 6.2 ± 0.34 | |
| Frontal Lobe | 6.53 ± 0.35 | |
| Globus Pallidus | 6.01 ± 0.27 | |
| Hypothalamus | 6.45 ± 0.42 | |
| Insula | 6.42 ± 0.31 | |
| Limbic Lobe | 6.5 ± 0.43 | |
| Mesencephalon | 6.33 ± 0.44 | |
| Myelencephalon | 6.4 ± 0.41 | |
| Occipital Lobe | 6.53 ± 0.32 | |
| Parietal Lobe | 6.39 ± 0.36 | |
| Pontine Tegmentum | 6.38 ± 0.44 | |
| Striatum | 6.83 ± 0.3 | |
| Subthalamus | 6.71 ± 0.48 | |
| Temporal Lobe | 6.33 ± 0.34 | |
| Thalamus | 6.49 ± 0.41 | |
| White Matter | 5.95 ± 0.44 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Eaf1 | CB | Cerebellum | 9.63 | |
| 10.34 | | |||
| Eaf1 | CTX | Cerebral cortex | 7.1 | |
| 4.74 | | |||
| Eaf1 | HIP | Hippocampal region | 3.08 | |
| 2.65 | | |||
| Eaf1 | HPF | Hippocampal formation | 5.32 | |
| 4.39 | | |||
| Eaf1 | HY | Hypothalamus | 3.59 | |
| 2.53 | | |||
| Eaf1 | LSX | Lateral septal complex | 0.55 | |
| 0.91 | | |||
| Eaf1 | MB | Midbrain | 10.33 | |
| 9.26 | | |||
| Eaf1 | MY | Medulla | 22.75 | |
| 24.8 | | |||
| Eaf1 | OLF | Olfactory bulb | 10.3 | |
| 7.91 | | |||
| Eaf1 | P | Pons | 13.76 | |
| 14.43 | | |||
| Eaf1 | PAL | Pallidum | 3.75 | |
| 3.65 | | |||
| Eaf1 | RHP | Retrohippocampal region | 9.56 | |
| 7.16 | | |||
| Eaf1 | sAMY | Striatum-like amygdalar nuclei | 2.39 | |
| 1.64 | | |||
| Eaf1 | STR | Striatum | 1.95 | |
| 1.35 | | |||
| Eaf1 | STRd | Striatum dorsal region | 1.98 | |
| 1.37 | | |||
| Eaf1 | STRv | Striatum ventral region | 1.94 | |
| 1.15 | | |||
| Eaf1 | TH | Thalamus | 5.7 | |
| 4.13 | |