Annotation Detail for GTPBP10
Basic Information Top
| Gene Symbol: | GTPBP10 ( DKFZp686A10121,FLJ38242,MGC104191,ObgH2 ) |
|---|---|
| Gene Full Name: | GTP-binding protein 10 (putative) |
| Band: | 7q21.13 |
| Quick Links | Entrez ID:85865; OMIM: 610920; Uniprot ID:GTPBA_HUMAN; ENSEMBL ID: ENSG00000105793; HGNC ID: 25106 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.709271
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 9 / 564012 | 15 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 37 / 1939121 | 19 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 |  |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 75 / 3360307 | 22 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 11 / 124949 | 88 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 22 / 1100989 | 19 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 0 / 89626 | 0 | |
| intestine | 8 / 234472 | 34 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 10 / 336974 | 29 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 16 / 210574 | 75 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 3 / 96619 | 31 | |
| testis | 8 / 330442 | 24 | |
| thymus | 5 / 81131 | 61 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_6365_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.57 ± 0.38 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.62 ± 0.3 | |
| Basal Part of Pons | 5.78 ± 0.31 | |
| Cerebellar Cortex | 6.03 ± 0.17 | |
| Cerebellar Nuclei | 5.67 ± 0.46 | |
| Claustrum | 5.34 ± 0.46 | |
| Epithalamus | 5.66 ± 0.29 | |
| Frontal Lobe | 5.73 ± 0.46 | |
| Globus Pallidus | 5.48 ± 0.29 | |
| Hypothalamus | 5.21 ± 1.13 | |
| Insula | 5.62 ± 0.36 | |
| Limbic Lobe | 5.63 ± 0.4 | |
| Mesencephalon | 5.75 ± 0.36 | |
| Myelencephalon | 5.6 ± 0.45 | |
| Occipital Lobe | 5.69 ± 0.45 | |
| Parietal Lobe | 5.73 ± 0.42 | |
| Pontine Tegmentum | 5.68 ± 0.5 | |
| Striatum | 5.3 ± 0.33 | |
| Subthalamus | 6.13 ± 0.08 | |
| Temporal Lobe | 5.67 ± 0.34 | |
| Thalamus | 5.67 ± 0.42 | |
| White Matter | 6.38 ± 0.12 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Gtpbp10 | CB | Cerebellum | 5.87 | |
| 6.12 | | |||
| Gtpbp10 | CTX | Cerebral cortex | 0.55 | |
| 0.64 | | |||
| Gtpbp10 | HIP | Hippocampal region | 3.1 | |
| 2.89 | | |||
| Gtpbp10 | HPF | Hippocampal formation | 2.14 | |
| 1.87 | | |||
| Gtpbp10 | HY | Hypothalamus | 0.41 | |
| 1.12 | | |||
| Gtpbp10 | LSX | Lateral septal complex | 0.13 | |
| 0.1 | | |||
| Gtpbp10 | MB | Midbrain | 0.98 | |
| 1.24 | | |||
| Gtpbp10 | MY | Medulla | 0.98 | |
| 1.19 | | |||
| Gtpbp10 | OLF | Olfactory bulb | 0.8 | |
| 0.76 | | |||
| Gtpbp10 | P | Pons | 0.65 | |
| 1 | | |||
| Gtpbp10 | PAL | Pallidum | 0.13 | |
| 0.27 | | |||
| Gtpbp10 | RHP | Retrohippocampal region | 0.2 | |
| 0.18 | | |||
| Gtpbp10 | sAMY | Striatum-like amygdalar nuclei | 0.27 | |
| 0.44 | | |||
| Gtpbp10 | STR | Striatum | 0.45 | |
| 0.54 | | |||
| Gtpbp10 | STRd | Striatum dorsal region | 0.48 | |
| 0.66 | | |||
| Gtpbp10 | STRv | Striatum ventral region | 0.5 | |
| 0.39 | | |||
| Gtpbp10 | TH | Thalamus | 0.89 | |
| 1.05 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00028245 | 26 | 315 | 340 | TVEFQHIIPISAVTGEGIEELKNCIR | Peptide Atlas |