AutismKB 2.0

Annotation Detail for CADPS


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Basic Information Top
Gene Symbol:CADPS ( CADPS1,CAPS,CAPS1,KIAA1121 )
Gene Full Name: Ca++-dependent secretion activator
Band: 3p14.2
Quick LinksEntrez ID:8618; OMIM: 604667; Uniprot ID:CAPS1_HUMAN; ENSEMBL ID: ENSG00000163618; HGNC ID: 1426
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus23 / 56401240
neonate0 / 310970 
infant2 / 2362084
juvenile3 / 5555653
adult54 / 193912127
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor7 / 26384526
glioma1 / 1068839
head and neck tumor0 / 1363020 
kidney tumor3 / 6895943
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia4 / 9725041
normal139 / 336030741
ovarian tumor1 / 7668213
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer1 / 1026809
retinoblastoma4 / 4635686
skin tumor4 / 12494932
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain79 / 110098971
cervix0 / 481710 
connective tissue2 / 14925513
ear1 / 1621261
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye22 / 211054104
heart0 / 896260 
intestine3 / 23447212
kidney3 / 21177714
larynx0 / 241450 
liver0 / 2077430 
lung5 / 33697414
lymph1 / 4427022
lymph node1 / 9161010
mammary gland1 / 1532716
mouth0 / 670520 
muscle0 / 1077150 
nerve3 / 15768190
ovary1 / 1020519
pancreas13 / 21481260
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland2 / 16585120
placenta0 / 2808250 
prostate4 / 18934521
salivary gland0 / 201550 
skin4 / 21057418
spleen2 / 5395237
stomach0 / 966190 
testis3 / 3304429
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: Primary tumors (U95A)
  • Affymatrix Probe ID: 31848_at
Cell line Expression level Expression bar
Pr1T5.203
Pr4T7.452
Pr5T5.915
Pr7T375.298
Pr1N6.797
Pr5N6.466
Pr6T7.827
Pr3N6.373
Pr3T6.898
Pr4N6.436
Pr2N17.75
Pr8N6.487
Pr8T7.097
Pr9N18.902
Pr10N6.935
Pr10T6.835
Pr9T5.949
Pr11T6.821
Pr12T6.782
Pr13AT6.716
Pr13BT6.465
Pr21T10.676
Pr22T6.568
Pr30T7.731
Pr23T7.448
Pr19T7.183
Pr26T6.848
Pr31T7.214
Pr16T7.059
Pr17T977.911
Pr24T6.336
Pr27T105.627
Pr29T27.511
OVR1026.666
HUOVR6.375
G27.754
G37.336
G57.372
G66.904
G86.366
G96.769
CO7T7.641
CO8T6.473
CO15T8.169
CO27T8.487
CO30T7.862
CO32T7.048
CO40T19.736
CO52N8.866
CO62N7.866
K16.31
K26.379
K35.649
K46.871
K14N8.512
K166.953
K178.402
K196.938
K206.921
K226.691
CO9T6.973
CO20T13.917
CO24T7.761
CO36N8.345
K186.473
P1N413.764
P2N81.737
P5N76.361
P86.787
P116.212
P179.829
K217.455
K25N7.86
K28N8.49
CO42T55.04
P225.934
P13N6.434
LU11T6.937
LU16T7.514
LU7T6.621
LU8T6.686
LU12T7.035
LU13T7.552
LU5T7.681
LU6T8.475
LU14T7.186
LU17T7.506
LU50N6.196
LU52N7.266
LU18T7.205
LU55N7.504
LU3N7.951
P16B8.845
P236.537
OVR166.49
OVR1998.859
OVR276.539
OVR286.372
OVR278E7.149
OVR26.472
OVR56.457
OVR87.253
OVR1145.173
OVR126.998
OVR136.557
OVR227.493
OVR267.457
OVR108.189
OVR278S7.989
OVR16.906
LU19T6.994
LU20T6.887
LU24T7.174
LU25T7.088
LU31T8.562
LU34T7.73
LU39T5.996
CO14T7.619
CO21T8.806
CO23T7.548
CO41N6.757
LU40T8.201
LU41T6.47
LU44T7.163
LU46T7.147
LU49T7.047
L5N7.545
LU42T7.199
LU30T7.553
LU43T9.061
CO5T7.624
CO44T6.717
CO49T9.117
CO51T7.543
CO56T24.199
CO61T6.833
LU26T7.824
LU33T8.456
LU36T6.821
CO43T7.852
G187.732
G466.817
L11T8.416
L13N7.792
L30T7.959
L31T8.183
L32T8.748
L34T8.456
L35T8.838
B1N8.428
B5N7.051
B8T7.313
B10T7.188
B14T8.128
B16T7.066
B17T7.299
B1NR8.01
B20T9.129
B51NR8.316
B6T9.543
B15T10
B21T11.142
B29T7.408
B31T8.499
B32T8.812
B24T6.997
B46T7.039
B34T7.551
B36T7.363
B37T7.838
B38T7.379
B39T6.499
X1027.264
X116_027.278
G2806.331
X466.471
X586.444
G1867.6
G2967.077
L38T7.091
L31T.26.911
L26N7.82
N257ANTR7.581
N285BODY6.67
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_7077_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.41 ± 0.34
Basal Forebrain8.76 ± 0.43
Basal Part of Pons9.98 ± 0.26
Cerebellar Cortex8.84 ± 0.33
Cerebellar Nuclei8.97 ± 0.5
Claustrum10.08 ± 0.61
Epithalamus7.55 ± 0.98
Frontal Lobe9.16 ± 0.52
Globus Pallidus8.84 ± 0.49
Hypothalamus8.88 ± 0.53
Insula9.23 ± 0.23
Limbic Lobe9.47 ± 0.4
Mesencephalon9.11 ± 0.64
Myelencephalon9.02 ± 0.64
Occipital Lobe9.48 ± 0.49
Parietal Lobe9.22 ± 0.51
Pontine Tegmentum8.9 ± 0.42
Striatum8.39 ± 0.69
Subthalamus9.68 ± 0.11
Temporal Lobe9.14 ± 0.3
Thalamus9.12 ± 0.43
White Matter6.63 ± 0.75
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
CadpsCBCerebellum49.38
100
CadpsCTXCerebral cortex100
100
CadpsHIPHippocampal region100
100
CadpsHPFHippocampal formation100
100
CadpsHYHypothalamus90.92
95.35
CadpsLSXLateral septal complex100
100
CadpsMBMidbrain100
100
CadpsMYMedulla94.99
100
CadpsOLFOlfactory bulb100
100
CadpsPPons100
100
CadpsPALPallidum90.2
100
CadpsRHPRetrohippocampal region100
100
CadpssAMYStriatum-like amygdalar nuclei89.94
89.05
CadpsSTRStriatum71.15
68.7
CadpsSTRdStriatum dorsal region62.15
59.18
CadpsSTRvStriatum ventral region66.14
64.33
CadpsTHThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
CAPS1_HUMAN_309 14 309 322 ELDGRLQMADQIAR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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