AutismKB 2.0

Annotation Detail for EIF3H


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Basic Information Top
Gene Symbol:EIF3H ( EIF3S3,MGC102958,eIF3-gamma,eIF3-p40 )
Gene Full Name: eukaryotic translation initiation factor 3, subunit H
Band: 8q23.3-q24.11
Quick LinksEntrez ID:8667; OMIM: 603912; Uniprot ID:EIF3H_HUMAN; ENSEMBL ID: ENSG00000147677; HGNC ID: 3273
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body17 / 70761240
blastocyst19 / 62319304
fetus70 / 564012124
neonate5 / 31097160
infant4 / 23620169
juvenile6 / 55556107
adult395 / 1939121203
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor3 / 12794234
bladder carcinoma0 / 174750 
breast (mammary gland) tumor37 / 94178392
cervical tumor18 / 34366523
chondrosarcoma23 / 82823277
colorectal tumor104 / 114246910
esophageal tumor3 / 17290173
gastrointestinal tumor24 / 119369201
germ cell tumor65 / 263845246
glioma14 / 106883130
head and neck tumor14 / 136302102
kidney tumor16 / 68959232
leukemia13 / 95842135
liver tumor37 / 96359383
lung tumor36 / 103127349
lymphoma33 / 71755459
non-neoplasia5 / 9725051
normal520 / 3360307154
ovarian tumor28 / 76682365
pancreatic tumor28 / 104616267
primitive neuroectodermal tumor of the CNS39 / 125680310
prostate cancer29 / 102680282
retinoblastoma29 / 46356625
skin tumor54 / 124949432
soft tissue/muscle tissue tumor49 / 125191391
uterine tumor39 / 90257432
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue8 / 13106610
adrenal gland6 / 33197180
ascites2 / 4001549
bladder5 / 29757168
blood21 / 123478170
bone18 / 71655251
bone marrow7 / 48801143
brain117 / 1100989106
cervix18 / 48171373
connective tissue35 / 149255234
ear0 / 162120 
embryonic tissue75 / 215722347
esophagus3 / 20209148
eye65 / 211054307
heart26 / 89626290
intestine124 / 234472528
kidney31 / 211777146
larynx0 / 241450 
liver47 / 207743226
lung72 / 336974213
lymph27 / 44270609
lymph node14 / 91610152
mammary gland47 / 153271306
mouth7 / 67052104
muscle23 / 107715213
nerve2 / 15768126
ovary30 / 102051293
pancreas50 / 214812232
parathyroid5 / 20539243
pharynx9 / 41328217
pituitary gland3 / 16585180
placenta49 / 280825174
prostate35 / 189345184
salivary gland5 / 20155248
skin68 / 210574322
spleen15 / 53952278
stomach20 / 96619206
testis42 / 330442127
thymus2 / 8113124
thyroid7 / 47473147
tonsil32 / 169991882
trachea2 / 5241338
umbilical cord5 / 13680365
uterus78 / 232878334
vascular6 / 51780115
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 201592_at
Cell line Expression level Expression bar
721_B_lymphoblasts1961.95
Adipocyte530.85
AdrenalCortex319.85
Adrenalgland135.3
Amygdala378.5
Appendix321.15
AtrioventricularNode146.65
BDCA4+_DentriticCells1779.8
Bonemarrow140.8
BronchialEpithelialCells1189.85
CD105+_Endothelial1792.45
CD14+_Monocytes2045.4
CD19+_BCells(neg._sel.)3062.35
CD33+_Myeloid2009.95
CD34+2639.9
CD4+_Tcells2364.75
CD56+_NKCells1509.7
CD71+_EarlyErythroid485.1
CD8+_Tcells2083.1
CardiacMyocytes645.65
Caudatenucleus266.2
Cerebellum140.8
CerebellumPeduncles235
CiliaryGanglion197.05
CingulateCortex243.1
Colorectaladenocarcinoma521.85
DorsalRootGanglion148.1
FetalThyroid699.2
Fetalbrain869.75
Fetalliver209.45
Fetallung645.2
GlobusPallidus125.9
Heart364.95
Hypothalamus485.9
Kidney145
Leukemia_chronicMyelogenousK-5621182.8
Leukemia_promyelocytic-HL-601088.45
Leukemialymphoblastic(MOLT-4)1493.75
Liver186.55
Lung562.6
Lymphnode830.55
Lymphoma_burkitts(Daudi)2957.05
Lymphoma_burkitts(Raji)1722.35
MedullaOblongata228.8
OccipitalLobe267.2
OlfactoryBulb336.45
Ovary598.95
Pancreas696.95
PancreaticIslet733.4
ParietalLobe186.9
Pituitary626.3
Placenta275.55
Pons152.35
PrefrontalCortex287.6
Prostate517.1
Salivarygland557.55
SkeletalMuscle153.55
Skin280.8
SmoothMuscle1171
Spinalcord377.65
SubthalamicNucleus165.25
SuperiorCervicalGanglion95.6
TemporalLobe184.75
Testis713.7
TestisGermCell872.15
TestisIntersitial787.35
TestisLeydigCell580.8
TestisSeminiferousTubule557.9
Thalamus330.45
Thymus727.7
Thyroid710.15
Tongue536
Tonsil711.15
Trachea317.6
TrigeminalGanglion138.75
Uterus706.85
UterusCorpus521.05
WholeBlood1006.95
Wholebrain310.75
colon403.25
pineal_day673.64
pineal_night612.62
retina272.95
small_intestine302
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P488649
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.94 ± 0.83
Basal Forebrain4.79 ± 0.5
Basal Part of Pons4.37 ± 0.83
Cerebellar Cortex4.13 ± 0.6
Cerebellar Nuclei4.36 ± 0.64
Claustrum5.22 ± 0.89
Epithalamus4.1 ± 0.97
Frontal Lobe4.21 ± 0.76
Globus Pallidus5.58 ± 0.37
Hypothalamus4.09 ± 0.65
Insula4.56 ± 0.73
Limbic Lobe4.88 ± 0.9
Mesencephalon4.81 ± 0.61
Myelencephalon4.64 ± 0.86
Occipital Lobe4.99 ± 0.75
Parietal Lobe4.61 ± 0.81
Pontine Tegmentum4.47 ± 0.72
Striatum5.28 ± 0.8
Subthalamus4.23 ± 1.29
Temporal Lobe4.46 ± 0.75
Thalamus4.53 ± 0.62
White Matter5.2 ± 0.57
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
EIF3H_HUMAN_0 0 0 0 NLQLLMDRVDEMSQDIVK PRIDE
EIF3H_HUMAN_206 15 206 220 NSHLINVLMWELEKK PRIDE
EIF3H_HUMAN_221 20 221 240 SAVADKHELLSLASSNHLGK PRIDE
EIF3H_HUMAN_241 18 241 258 NLQLLMDRVDEMSQDIVK PRIDE
EIF3H_HUMAN_242 8 242 249 NLQLLMDR PRIDE
EIF3H_HUMAN_281 8 281 288 RQQENMQR PRIDE
EIF3H_HUMAN_340 12 340 351 LFMAQALQEYNN PRIDE
PAp00003276 14 228 241 HELLSLASSNHLGK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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