Annotation Detail for CDS2
Basic Information Top
| Gene Symbol: | CDS2 ( FLJ38111 ) |
|---|---|
| Gene Full Name: | CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 |
| Band: | 20p12.3 |
| Quick Links | Entrez ID:8760; OMIM: 603549; Uniprot ID:CDS2_HUMAN; ENSEMBL ID: ENSG00000101290; HGNC ID: 1801 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 212862_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 37.85 |  |
| Adipocyte | 4.6 |  |
| AdrenalCortex | 4.95 | |
| Adrenalgland | 5.8 | |
| Amygdala | 5.5 | |
| Appendix | 7.6 | |
| AtrioventricularNode | 3.9 | |
| BDCA4+_DentriticCells | 8.85 | |
| Bonemarrow | 4.9 | |
| BronchialEpithelialCells | 15.75 | |
| CD105+_Endothelial | 4.9 | |
| CD14+_Monocytes | 9.25 | |
| CD19+_BCells(neg._sel.) | 8.7 | |
| CD33+_Myeloid | 6.2 | |
| CD34+ | 6.35 | |
| CD4+_Tcells | 9.45 | |
| CD56+_NKCells | 10.45 | |
| CD71+_EarlyErythroid | 3.6 | |
| CD8+_Tcells | 6.1 | |
| CardiacMyocytes | 7.4 | |
| Caudatenucleus | 4.25 | |
| Cerebellum | 5.15 | |
| CerebellumPeduncles | 5.95 | |
| CiliaryGanglion | 3.45 | |
| CingulateCortex | 6.1 | |
| Colorectaladenocarcinoma | 5.95 | |
| DorsalRootGanglion | 4 | |
| FetalThyroid | 4.75 | |
| Fetalbrain | 4.85 | |
| Fetalliver | 3.7 | |
| Fetallung | 4.75 | |
| GlobusPallidus | 3.15 | |
| Heart | 10 | |
| Hypothalamus | 11.4 | |
| Kidney | 4.1 | |
| Leukemia_chronicMyelogenousK-562 | 4.45 | |
| Leukemia_promyelocytic-HL-60 | 15.6 | |
| Leukemialymphoblastic(MOLT-4) | 15.7 | |
| Liver | 6.1 | |
| Lung | 5.8 | |
| Lymphnode | 5 | |
| Lymphoma_burkitts(Daudi) | 17.3 | |
| Lymphoma_burkitts(Raji) | 6.55 | |
| MedullaOblongata | 4.75 | |
| OccipitalLobe | 4.7 | |
| OlfactoryBulb | 4.1 | |
| Ovary | 3.25 | |
| Pancreas | 3.8 | |
| PancreaticIslet | 9.35 | |
| ParietalLobe | 5.15 | |
| Pituitary | 6.6 | |
| Placenta | 27.45 | |
| Pons | 4.5 | |
| PrefrontalCortex | 8.3 | |
| Prostate | 4.85 | |
| Salivarygland | 3.35 | |
| SkeletalMuscle | 5.05 | |
| Skin | 3.3 | |
| SmoothMuscle | 8.85 | |
| Spinalcord | 6.4 | |
| SubthalamicNucleus | 4 | |
| SuperiorCervicalGanglion | 6.1 | |
| TemporalLobe | 4.55 | |
| Testis | 50.8 |  |
| TestisGermCell | 15.4 | |
| TestisIntersitial | 8 | |
| TestisLeydigCell | 5.15 | |
| TestisSeminiferousTubule | 14.95 | |
| Thalamus | 13.55 | |
| Thymus | 14.4 | |
| Thyroid | 6.5 | |
| Tongue | 4.7 | |
| Tonsil | 5.1 | |
| Trachea | 4.35 | |
| TrigeminalGanglion | 5.1 | |
| Uterus | 4.25 | |
| UterusCorpus | 4.3 | |
| WholeBlood | 48.25 | |
| Wholebrain | 16.35 | |
| colon | 5.25 | |
| pineal_day | 19.56 | |
| pineal_night | 14.16 | |
| retina | 10.65 | |
| small_intestine | 8.35 | |
- Probe name: A_23_P154698
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.35 ± 0.31 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.39 ± 0.17 | |
| Basal Part of Pons | 6.64 ± 0.29 | |
| Cerebellar Cortex | 6.73 ± 0.23 | |
| Cerebellar Nuclei | 6.62 ± 0.28 | |
| Claustrum | 6.15 ± 0.4 | |
| Epithalamus | 6.43 ± 0.37 | |
| Frontal Lobe | 6.63 ± 0.32 | |
| Globus Pallidus | 6.77 ± 0.29 | |
| Hypothalamus | 6.64 ± 0.42 | |
| Insula | 6.74 ± 0.19 | |
| Limbic Lobe | 6.7 ± 0.3 | |
| Mesencephalon | 6.57 ± 0.43 | |
| Myelencephalon | 6.59 ± 0.38 | |
| Occipital Lobe | 6.58 ± 0.27 | |
| Parietal Lobe | 6.48 ± 0.35 | |
| Pontine Tegmentum | 6.6 ± 0.37 | |
| Striatum | 6.31 ± 0.31 | |
| Subthalamus | 6.32 ± 0.64 | |
| Temporal Lobe | 6.66 ± 0.3 | |
| Thalamus | 6.8 ± 0.32 | |
| White Matter | 5.98 ± 0.27 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Cds2 | CB | Cerebellum | 62.95 | |
| 76.12 | | |||
| Cds2 | CTX | Cerebral cortex | 72.63 | |
| 67.48 | | |||
| Cds2 | HIP | Hippocampal region | 82.94 | |
| 84.35 | | |||
| Cds2 | HPF | Hippocampal formation | 83.11 | |
| 81.5 | | |||
| Cds2 | HY | Hypothalamus | 81.28 | |
| 74.01 | | |||
| Cds2 | LSX | Lateral septal complex | 63.65 | |
| 60.26 | | |||
| Cds2 | MB | Midbrain | 76.7 | |
| 73.98 | | |||
| Cds2 | MY | Medulla | 80.26 | |
| 82.33 | | |||
| Cds2 | OLF | Olfactory bulb | 83.63 | |
| 75.23 | | |||
| Cds2 | P | Pons | 81.37 | |
| 82.24 | | |||
| Cds2 | PAL | Pallidum | 71.63 | |
| 72.3 | | |||
| Cds2 | RHP | Retrohippocampal region | 84.32 | |
| 77.98 | | |||
| Cds2 | sAMY | Striatum-like amygdalar nuclei | 74.01 | |
| 67.12 | | |||
| Cds2 | STR | Striatum | 35.79 | |
| 30.95 | | |||
| Cds2 | STRd | Striatum dorsal region | 18.49 | |
| 17.54 | | |||
| Cds2 | STRv | Striatum ventral region | 43.77 | |
| 32.22 | | |||
| Cds2 | TH | Thalamus | 72.34 | |
| 71.02 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| CDS2_HUMAN_408 | 21 | 408 | 428 | LIQQFLTLRPDQQLHIFNTLR | PRIDE |
| CDS2_HUMAN_45 | 13 | 45 | 57 | PVSADDTPEVLNR | PRIDE |
| CDS2_HUMAN_7 | 31 | 7 | 37 | VAHEPVAPPEDKESESEAKVDGETASDSESR | PRIDE |
| PAp00041513 | 21 | 409 | 429 | LIQQFLTLRPDQQLHIFNTLR | Peptide Atlas |