AutismKB 2.0

Annotation Detail for NAPG


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:NAPG ( GAMMASNAP )
Gene Full Name: N-ethylmaleimide-sensitive factor attachment protein, gamma
Band: 18p11.22
Quick LinksEntrez ID:8774; OMIM: 603216; Uniprot ID:SNAG_HUMAN; ENSEMBL ID: ENSG00000134265; HGNC ID: 7642
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst5 / 6231980
fetus38 / 56401267
neonate0 / 310970 
infant0 / 236200 
juvenile3 / 5555653
adult88 / 193912145
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma16 / 82823193
colorectal tumor5 / 11424643
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor13 / 26384549
glioma2 / 10688318
head and neck tumor9 / 13630266
kidney tumor1 / 6895914
leukemia6 / 9584262
liver tumor1 / 9635910
lung tumor3 / 10312729
lymphoma0 / 717550 
non-neoplasia5 / 9725051
normal212 / 336030763
ovarian tumor5 / 7668265
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor4 / 12494932
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor11 / 90257121
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood8 / 12347864
bone8 / 71655111
bone marrow0 / 488010 
brain94 / 110098985
cervix0 / 481710 
connective tissue11 / 14925573
ear0 / 162120 
embryonic tissue12 / 21572255
esophagus0 / 202090 
eye6 / 21105428
heart2 / 8962622
intestine9 / 23447238
kidney10 / 21177747
larynx0 / 241450 
liver6 / 20774328
lung11 / 33697432
lymph0 / 442700 
lymph node10 / 91610109
mammary gland1 / 1532716
mouth3 / 6705244
muscle8 / 10771574
nerve2 / 15768126
ovary5 / 10205148
pancreas5 / 21481223
parathyroid3 / 20539146
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta16 / 28082556
prostate2 / 18934510
salivary gland5 / 20155248
skin9 / 21057442
spleen0 / 539520 
stomach4 / 9661941
testis12 / 33044236
thymus3 / 8113136
thyroid1 / 4747321
tonsil0 / 169990 
trachea6 / 52413114
umbilical cord0 / 136800 
uterus19 / 23287881
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 210048_at
Cell line Expression level Expression bar
721_B_lymphoblasts41.6
Adipocyte10.05
AdrenalCortex16.9
Adrenalgland8.9
Amygdala10.55
Appendix14.55
AtrioventricularNode22.6
BDCA4+_DentriticCells17.7
Bonemarrow13.3
BronchialEpithelialCells15.8
CD105+_Endothelial19
CD14+_Monocytes11.5
CD19+_BCells(neg._sel.)11.35
CD33+_Myeloid26.9
CD34+13.65
CD4+_Tcells11.7
CD56+_NKCells13.85
CD71+_EarlyErythroid10.05
CD8+_Tcells10.3
CardiacMyocytes14.9
Caudatenucleus10.25
Cerebellum8.55
CerebellumPeduncles12.9
CiliaryGanglion16.9
CingulateCortex14.8
Colorectaladenocarcinoma16.25
DorsalRootGanglion18.35
FetalThyroid10.45
Fetalbrain9.95
Fetalliver9.3
Fetallung7.6
GlobusPallidus8.45
Heart18.8
Hypothalamus11.6
Kidney8.7
Leukemia_chronicMyelogenousK-56222.05
Leukemia_promyelocytic-HL-609.25
Leukemialymphoblastic(MOLT-4)9.9
Liver15.15
Lung11.3
Lymphnode7.55
Lymphoma_burkitts(Daudi)14.25
Lymphoma_burkitts(Raji)15.45
MedullaOblongata9.75
OccipitalLobe11.55
OlfactoryBulb8.3
Ovary8.25
Pancreas10.15
PancreaticIslet13.35
ParietalLobe11.9
Pituitary12.55
Placenta9.65
Pons11.05
PrefrontalCortex12.15
Prostate12.45
Salivarygland9.05
SkeletalMuscle14.4
Skin16.7
SmoothMuscle15
Spinalcord10.7
SubthalamicNucleus12.4
SuperiorCervicalGanglion44.4
TemporalLobe10.75
Testis8.95
TestisGermCell8.8
TestisIntersitial9.25
TestisLeydigCell11.2
TestisSeminiferousTubule9.2
Thalamus11.25
Thymus8.25
Thyroid11.1
Tongue12.9
Tonsil13.05
Trachea11.1
TrigeminalGanglion13.95
Uterus7.95
UterusCorpus11.75
WholeBlood12
Wholebrain9.3
colon10.7
pineal_day12.9
pineal_night14.16
retina12.15
small_intestine10.35
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P185314
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.14 ± 0.52
Basal Forebrain9.23 ± 0.2
Basal Part of Pons10.13 ± 0.23
Cerebellar Cortex9.64 ± 0.15
Cerebellar Nuclei9.94 ± 0.23
Claustrum9.34 ± 0.41
Epithalamus9.12 ± 0.49
Frontal Lobe9.81 ± 0.31
Globus Pallidus8.68 ± 0.29
Hypothalamus9.6 ± 0.26
Insula9.73 ± 0.29
Limbic Lobe9.51 ± 0.59
Mesencephalon9.45 ± 0.46
Myelencephalon9.46 ± 0.56
Occipital Lobe9.14 ± 0.62
Parietal Lobe9.62 ± 0.48
Pontine Tegmentum9.46 ± 0.32
Striatum8.83 ± 0.51
Subthalamus10.25 ± 0.37
Temporal Lobe9.61 ± 0.31
Thalamus9.34 ± 0.33
White Matter9.04 ± 0.24
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
NapgCBCerebellum7.85
9.09
NapgCTXCerebral cortex21.46
18.6
NapgHIPHippocampal region18.24
23.31
NapgHPFHippocampal formation17.27
19.52
NapgHYHypothalamus2.04
1.82
NapgLSXLateral septal complex0.38
0.23
NapgMBMidbrain6.61
7.64
NapgMYMedulla15.85
22.03
NapgOLFOlfactory bulb22.93
20.05
NapgPPons13.18
17.75
NapgPALPallidum2.97
3.37
NapgRHPRetrohippocampal region16.19
14.8
NapgsAMYStriatum-like amygdalar nuclei1.35
1.21
NapgSTRStriatum2.39
2.16
NapgSTRdStriatum dorsal region2.77
2.6
NapgSTRvStriatum ventral region1.79
1.38
NapgTHThalamus7.93
8.83
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00005831 15 182 196 NIYKEIENYPTCYKK Peptide Atlas
SNAG_HUMAN_101 20 101 120 ASMMYLENGTPDTAAMALER PRIDE
SNAG_HUMAN_152 11 152 162 QAVELLGKASR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved