AutismKB 2.0

Annotation Detail for PEX11B


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Basic Information Top
Gene Symbol:PEX11B ( PEX11-BETA )
Gene Full Name: peroxisomal biogenesis factor 11 beta
Band: 1q21.1
Quick LinksEntrez ID:8799; OMIM: 603867; Uniprot ID:PX11B_HUMAN; ENSEMBL ID: ENSG00000131779; HGNC ID: 8853
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst0 / 623190 
fetus16 / 56401228
neonate0 / 310970 
infant3 / 23620127
juvenile0 / 555560 
adult63 / 193912132
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma3 / 8282336
colorectal tumor4 / 11424635
esophageal tumor1 / 1729057
gastrointestinal tumor2 / 11936916
germ cell tumor4 / 26384515
glioma4 / 10688337
head and neck tumor2 / 13630214
kidney tumor2 / 6895929
leukemia2 / 9584220
liver tumor7 / 9635972
lung tumor5 / 10312748
lymphoma5 / 7175569
non-neoplasia0 / 972500 
normal132 / 336030739
ovarian tumor2 / 7668226
pancreatic tumor16 / 104616152
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma6 / 46356129
skin tumor8 / 12494964
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder3 / 29757100
blood1 / 1234788
bone3 / 7165541
bone marrow3 / 4880161
brain51 / 110098946
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus1 / 2020949
eye15 / 21105471
heart2 / 8962622
intestine11 / 23447246
kidney8 / 21177737
larynx0 / 241450 
liver7 / 20774333
lung12 / 33697435
lymph4 / 4427090
lymph node3 / 9161032
mammary gland8 / 15327152
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary4 / 10205139
pancreas18 / 21481283
parathyroid0 / 205390 
pharynx10 / 41328241
pituitary gland2 / 16585120
placenta14 / 28082549
prostate3 / 18934515
salivary gland9 / 20155446
skin10 / 21057447
spleen2 / 5395237
stomach3 / 9661931
testis14 / 33044242
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus5 / 23287821
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202658_at
Cell line Expression level Expression bar
721_B_lymphoblasts32.55
Adipocyte4.95
AdrenalCortex5
Adrenalgland4.05
Amygdala18.85
Appendix5.35
AtrioventricularNode3.65
BDCA4+_DentriticCells22.55
Bonemarrow4.6
BronchialEpithelialCells15.95
CD105+_Endothelial6.15
CD14+_Monocytes13.4
CD19+_BCells(neg._sel.)40.6
CD33+_Myeloid21.2
CD34+28.4
CD4+_Tcells19.55
CD56+_NKCells27.55
CD71+_EarlyErythroid5
CD8+_Tcells26.5
CardiacMyocytes5.3
Caudatenucleus9.75
Cerebellum14.05
CerebellumPeduncles6.65
CiliaryGanglion3.7
CingulateCortex9.95
Colorectaladenocarcinoma5
DorsalRootGanglion4.45
FetalThyroid4.65
Fetalbrain6
Fetalliver5.1
Fetallung4
GlobusPallidus4.9
Heart7.15
Hypothalamus27.3
Kidney4.75
Leukemia_chronicMyelogenousK-5624.9
Leukemia_promyelocytic-HL-604.7
Leukemialymphoblastic(MOLT-4)5
Liver6.95
Lung8.65
Lymphnode5.3
Lymphoma_burkitts(Daudi)6.9
Lymphoma_burkitts(Raji)5.7
MedullaOblongata11.25
OccipitalLobe6.15
OlfactoryBulb4.3
Ovary2.55
Pancreas3.45
PancreaticIslet5.6
ParietalLobe6.6
Pituitary8.15
Placenta9.2
Pons5.7
PrefrontalCortex24.95
Prostate4.75
Salivarygland4.3
SkeletalMuscle5.15
Skin4
SmoothMuscle6.1
Spinalcord5.5
SubthalamicNucleus5.4
SuperiorCervicalGanglion5.4
TemporalLobe5.45
Testis16.9
TestisGermCell8.6
TestisIntersitial4.35
TestisLeydigCell5.95
TestisSeminiferousTubule5.1
Thalamus13.7
Thymus10.25
Thyroid15.05
Tongue4.7
Tonsil6.35
Trachea7.05
TrigeminalGanglion4.2
Uterus6.15
UterusCorpus4.75
WholeBlood10.8
Wholebrain46.45
colon7.5
pineal_day48.88
pineal_night42.12
retina29.2
small_intestine15.25
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P126899
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.44 ± 0.44
Basal Forebrain7.49 ± 0.28
Basal Part of Pons8.16 ± 0.16
Cerebellar Cortex7.6 ± 0.21
Cerebellar Nuclei7.95 ± 0.25
Claustrum7.42 ± 0.34
Epithalamus7.31 ± 0.34
Frontal Lobe7.86 ± 0.31
Globus Pallidus6.81 ± 0.43
Hypothalamus8.02 ± 0.33
Insula7.8 ± 0.18
Limbic Lobe7.62 ± 0.53
Mesencephalon7.57 ± 0.44
Myelencephalon7.56 ± 0.52
Occipital Lobe7.25 ± 0.56
Parietal Lobe7.76 ± 0.42
Pontine Tegmentum7.58 ± 0.35
Striatum7.24 ± 0.49
Subthalamus7.82 ± 0.14
Temporal Lobe7.76 ± 0.42
Thalamus7.56 ± 0.32
White Matter6.77 ± 0.11
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Pex11bCBCerebellum16.59
20.87
Pex11bCTXCerebral cortex28.09
21.4
Pex11bHIPHippocampal region21.59
25.37
Pex11bHPFHippocampal formation26.14
26.76
Pex11bHYHypothalamus4.44
3.56
Pex11bLSXLateral septal complex5.81
4.67
Pex11bMBMidbrain8.79
8.67
Pex11bMYMedulla17.86
20.23
Pex11bOLFOlfactory bulb21.77
18.51
Pex11bPPons10.67
12.61
Pex11bPALPallidum5.68
5.38
Pex11bRHPRetrohippocampal region34.75
29.67
Pex11bsAMYStriatum-like amygdalar nuclei4.45
3.45
Pex11bSTRStriatum6.1
5.06
Pex11bSTRdStriatum dorsal region6.63
5.72
Pex11bSTRvStriatum ventral region5.83
4.44
Pex11bTHThalamus6.48
5.66
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00000181 15 20 34 AAQYACSLLGHALQR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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