Annotation Detail for DCAF5
Basic Information Top
| Gene Symbol: | DCAF5 ( BCRG2,BCRP2,D14S1461E,DKFZp434A035,KIAA1824,WDR22 ) |
|---|---|
| Gene Full Name: | DDB1 and CUL4 associated factor 5 |
| Band: | 14q24.1 |
| Quick Links | Entrez ID:8816; OMIM: 603812; Uniprot ID:DCAF5_HUMAN; ENSEMBL ID: ENSG00000139990; HGNC ID: 20224 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.509780
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 6 / 70761 | 84 |  |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 56 / 564012 | 99 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 111 / 1939121 | 57 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 10 / 263845 | 37 | |
| glioma | 8 / 106883 | 74 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 1 / 96359 | 10 |  |
| lung tumor | 8 / 103127 | 77 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 232 / 3360307 | 69 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 11 / 104616 | 105 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 7 / 90257 | 77 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 5 / 48801 | 102 | |
| brain | 43 / 1100989 | 39 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 16 / 215722 | 74 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 26 / 211054 | 123 | |
| heart | 10 / 89626 | 111 | |
| intestine | 8 / 234472 | 34 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 1 / 24145 | 41 | |
| liver | 3 / 207743 | 14 | |
| lung | 39 / 336974 | 115 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 11 / 91610 | 120 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 29 / 214812 | 135 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 10 / 189345 | 52 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 14 / 210574 | 66 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 49 / 330442 | 148 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 4 / 47473 | 84 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 14 / 232878 | 60 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P117346
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.93 ± 0.39 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 9.07 ± 0.11 | |
| Basal Part of Pons | 8.89 ± 0.2 | |
| Cerebellar Cortex | 9.27 ± 0.23 | |
| Cerebellar Nuclei | 8.81 ± 0.23 | |
| Claustrum | 8.68 ± 0.23 | |
| Epithalamus | 9.32 ± 0.33 | |
| Frontal Lobe | 9.09 ± 0.25 | |
| Globus Pallidus | 8.88 ± 0.1 | |
| Hypothalamus | 8.94 ± 0.26 | |
| Insula | 9.17 ± 0.19 | |
| Limbic Lobe | 9.17 ± 0.27 | |
| Mesencephalon | 9.02 ± 0.24 | |
| Myelencephalon | 9.04 ± 0.24 | |
| Occipital Lobe | 9.11 ± 0.21 | |
| Parietal Lobe | 9.02 ± 0.25 | |
| Pontine Tegmentum | 9.04 ± 0.25 | |
| Striatum | 9 ± 0.26 | |
| Subthalamus | 8.82 ± 0.33 | |
| Temporal Lobe | 9.11 ± 0.24 | |
| Thalamus | 9.04 ± 0.22 | |
| White Matter | 8.86 ± 0.12 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Wdr22 | CB | Cerebellum | 2.51 | |
| 2.39 | | |||
| Wdr22 | CTX | Cerebral cortex | 10.51 | |
| 7.5 | | |||
| Wdr22 | HIP | Hippocampal region | 6.96 | |
| 7.29 | | |||
| Wdr22 | HPF | Hippocampal formation | 7.84 | |
| 7.24 | | |||
| Wdr22 | HY | Hypothalamus | 0.18 | |
| 0.14 | | |||
| Wdr22 | LSX | Lateral septal complex | 0.27 | |
| 0.23 | | |||
| Wdr22 | MB | Midbrain | 1.95 | |
| 2.61 | | |||
| Wdr22 | MY | Medulla | 1.39 | |
| 1.63 | | |||
| Wdr22 | OLF | Olfactory bulb | 5.49 | |
| 4.36 | | |||
| Wdr22 | P | Pons | 2.23 | |
| 2.78 | | |||
| Wdr22 | PAL | Pallidum | 0.54 | |
| 0.66 | | |||
| Wdr22 | RHP | Retrohippocampal region | 9.34 | |
| 7.24 | | |||
| Wdr22 | sAMY | Striatum-like amygdalar nuclei | 0.39 | |
| 0.29 | | |||
| Wdr22 | STR | Striatum | 0.51 | |
| 0.41 | | |||
| Wdr22 | STRd | Striatum dorsal region | 0.51 | |
| 0.45 | | |||
| Wdr22 | STRv | Striatum ventral region | 0.59 | |
| 0.39 | | |||
| Wdr22 | TH | Thalamus | 1.28 | |
| 1.23 | |