AutismKB 2.0

Annotation Detail for FCGBP


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Basic Information Top
Gene Symbol:FCGBP ( FC(GAMMA)BP )
Gene Full Name: Fc fragment of IgG binding protein
Band: 19q13.2
Quick LinksEntrez ID:8857; OMIM: NA; Uniprot ID:FCGBP_HUMAN; ENSEMBL ID: ENSG00000090920; HGNC ID: 13572
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus2 / 5640123
neonate1 / 3109732
infant0 / 236200 
juvenile0 / 555560 
adult128 / 193912166
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor17 / 114246148
esophageal tumor0 / 172900 
gastrointestinal tumor19 / 119369159
germ cell tumor15 / 26384556
glioma23 / 106883215
head and neck tumor7 / 13630251
kidney tumor2 / 6895929
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma13 / 71755181
non-neoplasia12 / 97250123
normal87 / 336030725
ovarian tumor1 / 7668213
pancreatic tumor10 / 10461695
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor8 / 12519163
uterine tumor5 / 9025755
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites18 / 40015449
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow0 / 488010 
brain32 / 110098929
cervix1 / 4817120
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye9 / 21105442
heart1 / 8962611
intestine66 / 234472281
kidney8 / 21177737
larynx0 / 241450 
liver0 / 2077430 
lung4 / 33697411
lymph13 / 44270293
lymph node3 / 9161032
mammary gland7 / 15327145
mouth3 / 6705244
muscle10 / 10771592
nerve0 / 157680 
ovary2 / 10205119
pancreas12 / 21481255
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta5 / 28082517
prostate7 / 18934536
salivary gland0 / 201550 
skin2 / 2105749
spleen0 / 539520 
stomach2 / 9661920
testis1 / 3304423
thymus0 / 811310 
thyroid8 / 47473168
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord1 / 1368073
uterus5 / 23287821
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203240_at
Cell line Expression level Expression bar
721_B_lymphoblasts16.5
Adipocyte14.1
AdrenalCortex30.85
Adrenalgland20.4
Amygdala17.3
Appendix19.85
AtrioventricularNode26.3
BDCA4+_DentriticCells18.4
Bonemarrow17.1
BronchialEpithelialCells12.25
CD105+_Endothelial15.4
CD14+_Monocytes18.75
CD19+_BCells(neg._sel.)18.85
CD33+_Myeloid20.05
CD34+22.05
CD4+_Tcells22.6
CD56+_NKCells17.7
CD71+_EarlyErythroid14.2
CD8+_Tcells143.15
CardiacMyocytes13.95
Caudatenucleus15.8
Cerebellum14.2
CerebellumPeduncles19.55
CiliaryGanglion17.3
CingulateCortex17.1
Colorectaladenocarcinoma13.4
DorsalRootGanglion34.9
FetalThyroid1326.4
Fetalbrain17.5
Fetalliver13.6
Fetallung34.55
GlobusPallidus12.8
Heart22.1
Hypothalamus18.45
Kidney17.05
Leukemia_chronicMyelogenousK-56215.65
Leukemia_promyelocytic-HL-6015.55
Leukemialymphoblastic(MOLT-4)14.4
Liver22.85
Lung26.2
Lymphnode32.35
Lymphoma_burkitts(Daudi)21.2
Lymphoma_burkitts(Raji)24.45
MedullaOblongata16.05
OccipitalLobe14.25
OlfactoryBulb28.5
Ovary11.5
Pancreas11.95
PancreaticIslet79.5
ParietalLobe18.35
Pituitary20.55
Placenta116.35
Pons16.6
PrefrontalCortex18.85
Prostate84.15
Salivarygland20.25
SkeletalMuscle20.25
Skin38.95
SmoothMuscle11
Spinalcord23.9
SubthalamicNucleus15.9
SuperiorCervicalGanglion38.6
TemporalLobe19.45
Testis18.85
TestisGermCell15.05
TestisIntersitial15.3
TestisLeydigCell17.25
TestisSeminiferousTubule15
Thalamus17.7
Thymus16.9
Thyroid3795.25
Tongue17
Tonsil17.05
Trachea1753.55
TrigeminalGanglion17.2
Uterus12.85
UterusCorpus15.6
WholeBlood15.35
Wholebrain10.8
colon2750.6
pineal_day55.66
pineal_night52.52
retina24.85
small_intestine665.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
FcgbpCBCerebellum2.05
2.99
FcgbpCTXCerebral cortex0.89
0.92
FcgbpHIPHippocampal region0.7
1.41
FcgbpHPFHippocampal formation0.62
0.98
FcgbpHYHypothalamus0.21
0.25
FcgbpLSXLateral septal complex0.03
0
FcgbpMBMidbrain0.5
0.68
FcgbpMYMedulla0.98
1.09
FcgbpOLFOlfactory bulb1.36
1.07
FcgbpPPons0.25
0.47
FcgbpPALPallidum1.14
1.56
FcgbpRHPRetrohippocampal region0.51
0.44
FcgbpsAMYStriatum-like amygdalar nuclei0.51
0.69
FcgbpSTRStriatum0.83
1.02
FcgbpSTRdStriatum dorsal region1.1
1.39
FcgbpSTRvStriatum ventral region0.55
0.54
FcgbpTHThalamus0.94
0.97
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00028315 10 1366 1375 VAYDLVYYVR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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