AutismKB 2.0

Annotation Detail for CDC123


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Basic Information Top
Gene Symbol:CDC123 ( C10orf7,D123,FLJ13863 )
Gene Full Name: cell division cycle 123 homolog (S. cerevisiae)
Band: 10p14-p13
Quick LinksEntrez ID:8872; OMIM: NA; Uniprot ID:CD123_HUMAN; ENSEMBL ID: ENSG00000151465; HGNC ID: 16827
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body10 / 70761141
blastocyst10 / 62319160
fetus25 / 56401244
neonate0 / 310970 
infant4 / 23620169
juvenile2 / 5555635
adult103 / 193912153
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma1 / 1747557
breast (mammary gland) tumor7 / 9417874
cervical tumor4 / 34366116
chondrosarcoma9 / 82823108
colorectal tumor13 / 114246113
esophageal tumor8 / 17290462
gastrointestinal tumor17 / 119369142
germ cell tumor29 / 263845109
glioma10 / 10688393
head and neck tumor1 / 1363027
kidney tumor5 / 6895972
leukemia14 / 95842146
liver tumor13 / 96359134
lung tumor9 / 10312787
lymphoma8 / 71755111
non-neoplasia2 / 9725020
normal195 / 336030758
ovarian tumor4 / 7668252
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS8 / 12568063
prostate cancer11 / 102680107
retinoblastoma7 / 46356151
skin tumor15 / 124949120
soft tissue/muscle tissue tumor19 / 125191151
uterine tumor5 / 9025755
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites10 / 40015249
bladder1 / 2975733
blood6 / 12347848
bone10 / 71655139
bone marrow15 / 48801307
brain45 / 110098940
cervix4 / 4817183
connective tissue8 / 14925553
ear0 / 162120 
embryonic tissue31 / 215722143
esophagus8 / 20209395
eye20 / 21105494
heart0 / 896260 
intestine27 / 234472115
kidney22 / 211777103
larynx1 / 2414541
liver20 / 20774396
lung24 / 33697471
lymph6 / 44270135
lymph node6 / 9161065
mammary gland12 / 15327178
mouth0 / 670520 
muscle2 / 10771518
nerve2 / 15768126
ovary2 / 10205119
pancreas5 / 21481223
parathyroid2 / 2053997
pharynx10 / 41328241
pituitary gland0 / 165850 
placenta11 / 28082539
prostate21 / 189345110
salivary gland2 / 2015599
skin20 / 21057494
spleen5 / 5395292
stomach4 / 9661941
testis11 / 33044233
thymus3 / 8113136
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus22 / 23287894
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 201725_at
Cell line Expression level Expression bar
721_B_lymphoblasts1025.25
Adipocyte189.65
AdrenalCortex58.7
Adrenalgland77.3
Amygdala190.8
Appendix30.7
AtrioventricularNode36.1
BDCA4+_DentriticCells482.45
Bonemarrow112.8
BronchialEpithelialCells596.2
CD105+_Endothelial317.4
CD14+_Monocytes256.15
CD19+_BCells(neg._sel.)575.2
CD33+_Myeloid253.9
CD34+542.85
CD4+_Tcells224.05
CD56+_NKCells384.7
CD71+_EarlyErythroid74.9
CD8+_Tcells170.95
CardiacMyocytes301.9
Caudatenucleus213.25
Cerebellum33.7
CerebellumPeduncles55.45
CiliaryGanglion97.45
CingulateCortex112.85
Colorectaladenocarcinoma280.3
DorsalRootGanglion54.5
FetalThyroid129.2
Fetalbrain201.3
Fetalliver60.3
Fetallung114.5
GlobusPallidus132.5
Heart136.15
Hypothalamus226.65
Kidney44
Leukemia_chronicMyelogenousK-562375.05
Leukemia_promyelocytic-HL-60474.65
Leukemialymphoblastic(MOLT-4)337.8
Liver94.8
Lung152.1
Lymphnode104.15
Lymphoma_burkitts(Daudi)643.95
Lymphoma_burkitts(Raji)849.35
MedullaOblongata126.35
OccipitalLobe172.15
OlfactoryBulb68
Ovary42.3
Pancreas58.05
PancreaticIslet137.2
ParietalLobe117.65
Pituitary226.4
Placenta138.6
Pons127.3
PrefrontalCortex158.2
Prostate276.55
Salivarygland87
SkeletalMuscle28.4
Skin102.1
SmoothMuscle396.2
Spinalcord146.9
SubthalamicNucleus117
SuperiorCervicalGanglion64
TemporalLobe75.35
Testis217.95
TestisGermCell120.55
TestisIntersitial82.65
TestisLeydigCell97.3
TestisSeminiferousTubule87.75
Thalamus131.85
Thymus222.9
Thyroid249.25
Tongue50.5
Tonsil214.15
Trachea84.9
TrigeminalGanglion43.4
Uterus249.85
UterusCorpus55.7
WholeBlood667.9
Wholebrain253.9
colon179.2
pineal_day200.28
pineal_night198.86
retina101.4
small_intestine195.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_13555_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.37 ± 0.37
Basal Forebrain5.34 ± 0.33
Basal Part of Pons5.69 ± 0.38
Cerebellar Cortex5.32 ± 0.63
Cerebellar Nuclei5.2 ± 0.5
Claustrum4.95 ± 0.81
Epithalamus5.15 ± 0.35
Frontal Lobe5.51 ± 0.42
Globus Pallidus5.36 ± 0.3
Hypothalamus5.3 ± 0.38
Insula5.48 ± 0.5
Limbic Lobe5.25 ± 0.55
Mesencephalon5.3 ± 0.5
Myelencephalon5.22 ± 0.49
Occipital Lobe4.87 ± 0.48
Parietal Lobe5.32 ± 0.41
Pontine Tegmentum5.35 ± 0.46
Striatum5.3 ± 0.42
Subthalamus5.44 ± 0.75
Temporal Lobe5.38 ± 0.41
Thalamus5.12 ± 0.45
White Matter5.08 ± 0.6
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00065634 11 194 204 DYTQYYDHISK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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