AutismKB 2.0

Annotation Detail for GYG2


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Basic Information Top
Gene Symbol:GYG2 ( GN-2,GN2 )
Gene Full Name: glycogenin 2
Band: Xp22.33
Quick LinksEntrez ID:8908; OMIM: 300198; Uniprot ID:GLYG2_HUMAN; ENSEMBL ID: ENSG00000056998; HGNC ID: 4700
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst8 / 62319128
fetus6 / 56401210
neonate0 / 310970 
infant0 / 236200 
juvenile2 / 5555635
adult14 / 19391217
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor5 / 11936941
germ cell tumor8 / 26384530
glioma1 / 1068839
head and neck tumor1 / 1363027
kidney tumor2 / 6895929
leukemia0 / 958420 
liver tumor4 / 9635941
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia1 / 9725010
normal63 / 336030718
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor19 / 124949152
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue11 / 13106839
adrenal gland0 / 331970 
ascites5 / 40015124
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain17 / 110098915
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue14 / 21572264
esophagus0 / 202090 
eye5 / 21105423
heart1 / 8962611
intestine1 / 2344724
kidney3 / 21177714
larynx0 / 241450 
liver5 / 20774324
lung2 / 3369745
lymph1 / 4427022
lymph node0 / 916100 
mammary gland4 / 15327126
mouth1 / 6705214
muscle5 / 10771546
nerve0 / 157680 
ovary5 / 10205148
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate1 / 1893455
salivary gland0 / 201550 
skin19 / 21057490
spleen0 / 539520 
stomach1 / 9661910
testis3 / 3304429
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 210963_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.55
Adipocyte51.3
AdrenalCortex5.15
Adrenalgland4.05
Amygdala4.95
Appendix4.95
AtrioventricularNode5.3
BDCA4+_DentriticCells4.9
Bonemarrow4.65
BronchialEpithelialCells4.5
CD105+_Endothelial4.65
CD14+_Monocytes4.9
CD19+_BCells(neg._sel.)4.9
CD33+_Myeloid5.75
CD34+5.75
CD4+_Tcells5.05
CD56+_NKCells5.35
CD71+_EarlyErythroid4.35
CD8+_Tcells4.5
CardiacMyocytes6.3
Caudatenucleus4.2
Cerebellum3.8
CerebellumPeduncles5.25
CiliaryGanglion3.9
CingulateCortex4.85
Colorectaladenocarcinoma4.65
DorsalRootGanglion4.05
FetalThyroid4.5
Fetalbrain4.65
Fetalliver4.15
Fetallung3.9
GlobusPallidus3.45
Heart5.9
Hypothalamus5.1
Kidney3.85
Leukemia_chronicMyelogenousK-5624.25
Leukemia_promyelocytic-HL-604.15
Leukemialymphoblastic(MOLT-4)3.8
Liver6.3
Lung5.1
Lymphnode4
Lymphoma_burkitts(Daudi)6
Lymphoma_burkitts(Raji)6.7
MedullaOblongata4.3
OccipitalLobe4.2
OlfactoryBulb4.6
Ovary3.3
Pancreas3.75
PancreaticIslet5
ParietalLobe5.05
Pituitary5.45
Placenta4.65
Pons4.7
PrefrontalCortex5.8
Prostate5.5
Salivarygland5.5
SkeletalMuscle5.65
Skin3.8
SmoothMuscle5.2
Spinalcord11.2
SubthalamicNucleus4.25
SuperiorCervicalGanglion6.55
TemporalLobe4.3
Testis4
TestisGermCell3.95
TestisIntersitial3.95
TestisLeydigCell4.65
TestisSeminiferousTubule4.05
Thalamus4.75
Thymus3.65
Thyroid5.75
Tongue4.7
Tonsil4.55
Trachea3.95
TrigeminalGanglion5.1
Uterus3.85
UterusCorpus4.25
WholeBlood5.05
Wholebrain3.85
colon4.7
pineal_day5.74
pineal_night5.64
retina9.175
small_intestine4.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P217704
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.36 ± 0.77
Basal Forebrain5.11 ± 0.33
Basal Part of Pons3.63 ± 0.48
Cerebellar Cortex4.07 ± 0.52
Cerebellar Nuclei5.02 ± 0.76
Claustrum3.74 ± 0.62
Epithalamus6.12 ± 0.55
Frontal Lobe4.51 ± 0.66
Globus Pallidus6.08 ± 0.32
Hypothalamus5.06 ± 0.73
Insula4.46 ± 0.53
Limbic Lobe4.55 ± 0.89
Mesencephalon4.77 ± 0.72
Myelencephalon4.64 ± 0.62
Occipital Lobe3.81 ± 0.8
Parietal Lobe4.32 ± 0.7
Pontine Tegmentum4.46 ± 0.47
Striatum4.44 ± 0.77
Subthalamus4.64 ± 0.5
Temporal Lobe4.42 ± 0.69
Thalamus4.32 ± 0.52
White Matter4.34 ± 1.13
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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