AutismKB 2.0

Annotation Detail for BAIAP3


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:BAIAP3 ( BAP3,KIAA0734,MGC138334 )
Gene Full Name: BAI1-associated protein 3
Band: 16p13.3
Quick LinksEntrez ID:8938; OMIM: 604009; Uniprot ID:BAIP3_HUMAN; ENSEMBL ID: ENSG00000007516; HGNC ID: 948
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus3 / 5640125
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult44 / 193912122
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor3 / 11936925
germ cell tumor12 / 26384545
glioma2 / 10688318
head and neck tumor1 / 1363027
kidney tumor2 / 6895929
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal271 / 336030780
ovarian tumor2 / 7668226
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer3 / 10268029
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder0 / 297570 
blood1 / 1234788
bone0 / 716550 
bone marrow0 / 488010 
brain254 / 1100989230
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye1 / 2110544
heart0 / 896260 
intestine2 / 2344728
kidney2 / 2117779
larynx0 / 241450 
liver0 / 2077430 
lung3 / 3369748
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth1 / 6705214
muscle0 / 1077150 
nerve0 / 157680 
ovary4 / 10205139
pancreas10 / 21481246
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland3 / 16585180
placenta0 / 2808250 
prostate3 / 18934515
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach1 / 9661910
testis27 / 33044281
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea9 / 52413171
umbilical cord0 / 136800 
uterus4 / 23287817
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 216356_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts4.75
Adipocyte4.1
AdrenalCortex6.05
Adrenalgland4.75
Amygdala30.55
Appendix6.35
AtrioventricularNode3.7
BDCA4+_DentriticCells4.6
Bonemarrow4.5
BronchialEpithelialCells4.1
CD105+_Endothelial3.95
CD14+_Monocytes4.1
CD19+_BCells(neg._sel.)6.5
CD33+_Myeloid4.9
CD34+4.9
CD4+_Tcells4.5
CD56+_NKCells4.8
CD71+_EarlyErythroid3.85
CD8+_Tcells3.8
CardiacMyocytes5.15
Caudatenucleus5.2
Cerebellum3.35
CerebellumPeduncles4.7
CiliaryGanglion3.25
CingulateCortex19.25
Colorectaladenocarcinoma3.85
DorsalRootGanglion3.6
FetalThyroid4.05
Fetalbrain4.8
Fetalliver3.35
Fetallung3.85
GlobusPallidus7
Heart5.4
Hypothalamus151
Kidney3.65
Leukemia_chronicMyelogenousK-5625.2
Leukemia_promyelocytic-HL-603.7
Leukemialymphoblastic(MOLT-4)3.35
Liver5.5
Lung4.6
Lymphnode3.85
Lymphoma_burkitts(Daudi)5.3
Lymphoma_burkitts(Raji)5.3
MedullaOblongata5.15
OccipitalLobe8.35
OlfactoryBulb3.35
Ovary2.95
Pancreas3.5
PancreaticIslet4.45
ParietalLobe6.45
Pituitary102.85
Placenta4.15
Pons9.65
PrefrontalCortex25.95
Prostate4.95
Salivarygland5.15
SkeletalMuscle5.45
Skin3.65
SmoothMuscle4.65
Spinalcord11.9
SubthalamicNucleus9.85
SuperiorCervicalGanglion5.1
TemporalLobe8.5
Testis3.9
TestisGermCell3.55
TestisIntersitial4.1
TestisLeydigCell6.4
TestisSeminiferousTubule6.8
Thalamus10.35
Thymus3.2
Thyroid4.8
Tongue5
Tonsil4
Trachea5
TrigeminalGanglion4.8
Uterus3.15
UterusCorpus3.7
WholeBlood4.55
Wholebrain4.1
colon3.9
pineal_day5.26
pineal_night4.96
retina6.3
small_intestine3.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_7431_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.39 ± 0.67
Basal Forebrain4.14 ± 0.82
Basal Part of Pons2.89 ± 0.82
Cerebellar Cortex2.84 ± 0.51
Cerebellar Nuclei3.32 ± 0.92
Claustrum3.77 ± 0.89
Epithalamus5 ± 0.76
Frontal Lobe3.92 ± 0.88
Globus Pallidus2.97 ± 1.42
Hypothalamus4.58 ± 0.86
Insula4.32 ± 0.78
Limbic Lobe3.81 ± 0.81
Mesencephalon3.74 ± 1.01
Myelencephalon3.6 ± 1.02
Occipital Lobe2.56 ± 1.11
Parietal Lobe3.41 ± 0.88
Pontine Tegmentum3.74 ± 0.89
Striatum2.94 ± 1.37
Subthalamus2.89 ± 0.78
Temporal Lobe3.81 ± 0.85
Thalamus2.99 ± 0.86
White Matter2.8 ± 0.75
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Baiap3CBCerebellum4.23
5.83
Baiap3CTXCerebral cortex3.85
3.32
Baiap3HIPHippocampal region2.16
2.57
Baiap3HPFHippocampal formation3.54
3.31
Baiap3HYHypothalamus100
93.6
Baiap3LSXLateral septal complex85.98
67.59
Baiap3MBMidbrain58.12
48.86
Baiap3MYMedulla21.89
21.8
Baiap3OLFOlfactory bulb14.54
11.21
Baiap3PPons34.93
29.1
Baiap3PALPallidum66.63
62.67
Baiap3RHPRetrohippocampal region5.22
3.9
Baiap3sAMYStriatum-like amygdalar nuclei96.47
79.96
Baiap3STRStriatum22.25
18.48
Baiap3STRdStriatum dorsal region2.46
2.01
Baiap3STRvStriatum ventral region26.68
18.04
Baiap3THThalamus16.53
14.89
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved