AutismKB 2.0

Annotation Detail for HIST1H2BJ


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:HIST1H2BJ ( H2B/r,H2BFR )
Gene Full Name: histone cluster 1, H2bj
Band: 6p22.1
Quick LinksEntrez ID:8970; OMIM: NA; Uniprot ID:H2B1J_HUMAN; ENSEMBL ID: ENSG00000124635; HGNC ID: 4761
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult2 / 19391211
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal0 / 33603070 
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis1 / 3304423
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 214502_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.05
Adipocyte6.95
AdrenalCortex9.1
Adrenalgland6.35
Amygdala7.05
Appendix8.9
AtrioventricularNode7.15
BDCA4+_DentriticCells7.55
Bonemarrow8
BronchialEpithelialCells6.8
CD105+_Endothelial7.2
CD14+_Monocytes7.7
CD19+_BCells(neg._sel.)7.3
CD33+_Myeloid8.6
CD34+8.75
CD4+_Tcells7.1
CD56+_NKCells8.5
CD71+_EarlyErythroid6.95
CD8+_Tcells6.8
CardiacMyocytes12.8
Caudatenucleus6.5
Cerebellum5.9
CerebellumPeduncles8.95
CiliaryGanglion10.15
CingulateCortex7.65
Colorectaladenocarcinoma7.3
DorsalRootGanglion6.2
FetalThyroid7.6
Fetalbrain6.9
Fetalliver6.55
Fetallung5.35
GlobusPallidus5.75
Heart12.55
Hypothalamus7.3
Kidney6.4
Leukemia_chronicMyelogenousK-56213.65
Leukemia_promyelocytic-HL-606.35
Leukemialymphoblastic(MOLT-4)5.6
Liver10.75
Lung7.8
Lymphnode5.95
Lymphoma_burkitts(Daudi)9.75
Lymphoma_burkitts(Raji)11.4
MedullaOblongata6.35
OccipitalLobe6.4
OlfactoryBulb5.55
Ovary5.15
Pancreas6.05
PancreaticIslet7.8
ParietalLobe8.15
Pituitary8.45
Placenta7.05
Pons7.2
PrefrontalCortex8.3
Prostate8.15
Salivarygland6.1
SkeletalMuscle11.55
Skin6.4
SmoothMuscle8
Spinalcord7.6
SubthalamicNucleus7
SuperiorCervicalGanglion10.3
TemporalLobe6.8
Testis6.2
TestisGermCell5.9
TestisIntersitial6.35
TestisLeydigCell7.75
TestisSeminiferousTubule6.15
Thalamus7.55
Thymus5.3
Thyroid8.45
Tongue7.85
Tonsil7.15
Trachea5.95
TrigeminalGanglion9.8
Uterus5.7
UterusCorpus7.4
WholeBlood8.65
Wholebrain5.75
colon7.15
pineal_day8.72
pineal_night8.58
retina8.675
small_intestine6.8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P55148
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.15 ± 0.34
Basal Forebrain7.29 ± 0.29
Basal Part of Pons7.08 ± 0.4
Cerebellar Cortex7.31 ± 0.35
Cerebellar Nuclei7.41 ± 0.34
Claustrum7.12 ± 0.63
Epithalamus7.57 ± 0.24
Frontal Lobe6.9 ± 0.42
Globus Pallidus7.46 ± 0.44
Hypothalamus7.44 ± 0.48
Insula6.78 ± 0.43
Limbic Lobe6.83 ± 0.37
Mesencephalon6.99 ± 0.42
Myelencephalon6.99 ± 0.43
Occipital Lobe6.83 ± 0.31
Parietal Lobe6.98 ± 0.4
Pontine Tegmentum6.98 ± 0.48
Striatum7.17 ± 0.51
Subthalamus6.91 ± 0.29
Temporal Lobe6.88 ± 0.36
Thalamus6.92 ± 0.32
White Matter7.73 ± 0.43
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
H2B1J_HUMAN_1 29 1 29 PEPAKSAPAPKKGSKKAVTKAQKKDGKKR PRIDE
H2B1J_HUMAN_34 10 34 43 KESYSIYVYK PRIDE
H2B1J_HUMAN_35 9 35 43 ESYSIYVYK PRIDE
H2B1J_HUMAN_80 7 80 86 LAHYNKR PRIDE
PAp00000587 15 59 73 AMGIMNSFVNDIFER Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved