Annotation Detail for ATPBD4
Basic Information Top
| Gene Symbol: | ATPBD4 ( MGC14798 ) |
|---|---|
| Gene Full Name: | ATP binding domain 4 |
| Band: | 15q14 |
| Quick Links | Entrez ID:89978; OMIM: NA; Uniprot ID:ATBD4_HUMAN; ENSEMBL ID: ENSG00000134146; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.107196
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 5 / 564012 | 8 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 8 / 1939121 | 4 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 39 / 3360307 | 11 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 2 / 29757 | 67 |  |
| blood | 1 / 123478 | 8 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 25 / 1100989 | 22 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 4 / 336974 | 11 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 1 / 96619 | 10 | |
| testis | 2 / 330442 | 6 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P56557
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.45 ± 0.46 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.95 ± 0.4 | |
| Basal Part of Pons | 5.13 ± 0.44 | |
| Cerebellar Cortex | 5.93 ± 0.22 | |
| Cerebellar Nuclei | 5.45 ± 0.53 | |
| Claustrum | 5.12 ± 0.4 | |
| Epithalamus | 6.28 ± 0.56 | |
| Frontal Lobe | 5.44 ± 0.41 | |
| Globus Pallidus | 6.18 ± 0.51 | |
| Hypothalamus | 5.69 ± 0.4 | |
| Insula | 5.46 ± 0.42 | |
| Limbic Lobe | 5.5 ± 0.46 | |
| Mesencephalon | 5.81 ± 0.43 | |
| Myelencephalon | 5.61 ± 0.52 | |
| Occipital Lobe | 5.53 ± 0.46 | |
| Parietal Lobe | 5.52 ± 0.48 | |
| Pontine Tegmentum | 5.54 ± 0.39 | |
| Striatum | 5.99 ± 0.58 | |
| Subthalamus | 5.1 ± 0.39 | |
| Temporal Lobe | 5.43 ± 0.34 | |
| Thalamus | 5.55 ± 0.4 | |
| White Matter | 6.85 ± 0.4 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Atpbd4 | CB | Cerebellum | 0.48 | |
| 1.51 | | |||
| Atpbd4 | CTX | Cerebral cortex | 0.6 | |
| 0.92 | | |||
| Atpbd4 | HIP | Hippocampal region | 1.36 | |
| 2.86 | | |||
| Atpbd4 | HPF | Hippocampal formation | 1.2 | |
| 2.21 | | |||
| Atpbd4 | HY | Hypothalamus | 5.18 | |
| 8.71 | | |||
| Atpbd4 | LSX | Lateral septal complex | 0.09 | |
| 0.95 | | |||
| Atpbd4 | MB | Midbrain | 3.18 | |
| 5.57 | | |||
| Atpbd4 | MY | Medulla | 1.57 | |
| 2.93 | | |||
| Atpbd4 | OLF | Olfactory bulb | 0.88 | |
| 2.58 | | |||
| Atpbd4 | P | Pons | 3.67 | |
| 6.97 | | |||
| Atpbd4 | PAL | Pallidum | 3.18 | |
| 4.68 | | |||
| Atpbd4 | RHP | Retrohippocampal region | 0.61 | |
| 0.51 | | |||
| Atpbd4 | sAMY | Striatum-like amygdalar nuclei | 1.58 | |
| 3.48 | | |||
| Atpbd4 | STR | Striatum | 0.62 | |
| 1.26 | | |||
| Atpbd4 | STRd | Striatum dorsal region | 0.18 | |
| 0.64 | | |||
| Atpbd4 | STRv | Striatum ventral region | 1.9 | |
| 2.1 | | |||
| Atpbd4 | TH | Thalamus | 0.41 | |
| 0.77 | |