Annotation Detail for CCDC120
Basic Information Top
| Gene Symbol: | CCDC120 ( - ) |
|---|---|
| Gene Full Name: | coiled-coil domain containing 120 |
| Band: | Xp11.23 |
| Quick Links | Entrez ID:90060; OMIM: NA; Uniprot ID:CC120_HUMAN; ENSEMBL ID: ENSG00000147144; HGNC ID: 28910 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.522643
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 9 / 564012 | 15 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 30 / 1939121 | 15 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 9 / 136302 | 66 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 62 / 3360307 | 18 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 2 / 29757 | 67 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 34 / 1100989 | 30 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 9 / 234472 | 38 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 8 / 67052 | 119 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 13 / 280825 | 46 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 6 / 52413 | 114 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P48983
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.16 ± 0.66 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.05 ± 0.22 | |
| Basal Part of Pons | 6.09 ± 0.29 | |
| Cerebellar Cortex | 5.77 ± 0.47 | |
| Cerebellar Nuclei | 6.45 ± 0.49 | |
| Claustrum | 6.49 ± 0.72 | |
| Epithalamus | 5.36 ± 0.27 | |
| Frontal Lobe | 5.97 ± 0.54 | |
| Globus Pallidus | 6.41 ± 0.32 | |
| Hypothalamus | 5.76 ± 0.47 | |
| Insula | 5.89 ± 0.39 | |
| Limbic Lobe | 6.03 ± 0.52 | |
| Mesencephalon | 6.22 ± 0.44 | |
| Myelencephalon | 6.1 ± 0.55 | |
| Occipital Lobe | 6.11 ± 0.47 | |
| Parietal Lobe | 6.02 ± 0.49 | |
| Pontine Tegmentum | 5.95 ± 0.45 | |
| Striatum | 6.35 ± 0.39 | |
| Subthalamus | 6.08 ± 0.18 | |
| Temporal Lobe | 5.95 ± 0.55 | |
| Thalamus | 6.21 ± 0.39 | |
| White Matter | 5.96 ± 0.22 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ccdc120 | CB | Cerebellum | 11.28 | |
| 14.06 | | |||
| Ccdc120 | CTX | Cerebral cortex | 9.29 | |
| 7.48 | | |||
| Ccdc120 | HIP | Hippocampal region | 6.9 | |
| 7.39 | | |||
| Ccdc120 | HPF | Hippocampal formation | 7.52 | |
| 7.11 | | |||
| Ccdc120 | HY | Hypothalamus | 2.64 | |
| 1.75 | | |||
| Ccdc120 | LSX | Lateral septal complex | 3.22 | |
| 2.69 | | |||
| Ccdc120 | MB | Midbrain | 6.28 | |
| 5.07 | | |||
| Ccdc120 | MY | Medulla | 19.72 | |
| 21.49 | | |||
| Ccdc120 | OLF | Olfactory bulb | 9.19 | |
| 8.36 | | |||
| Ccdc120 | P | Pons | 9.41 | |
| 8.23 | | |||
| Ccdc120 | PAL | Pallidum | 3.29 | |
| 3.16 | | |||
| Ccdc120 | RHP | Retrohippocampal region | 8.98 | |
| 7.07 | | |||
| Ccdc120 | sAMY | Striatum-like amygdalar nuclei | 11.75 | |
| 7.7 | | |||
| Ccdc120 | STR | Striatum | 4.77 | |
| 3.39 | | |||
| Ccdc120 | STRd | Striatum dorsal region | 4.91 | |
| 3.65 | | |||
| Ccdc120 | STRv | Striatum ventral region | 1.27 | |
| 0.69 | | |||
| Ccdc120 | TH | Thalamus | 6.43 | |
| 4.57 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00009761 | 21 | 594 | 614 | CYEVGQALYGAPSQAPLPHSR | Peptide Atlas |