Annotation Detail for C9orf69
Basic Information Top
| Gene Symbol: | C9orf69 ( bA83N9.1 ) |
|---|---|
| Gene Full Name: | chromosome 9 open reading frame 69 |
| Band: | 9q34.3 |
| Quick Links | Entrez ID:90120; OMIM: NA; Uniprot ID:; ENSEMBL ID: ; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.287411
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 5 / 62319 | 80 |  |
| fetus | 11 / 564012 | 19 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 77 / 1939121 | 39 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 3 / 34366 | 87 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 10 / 119369 | 83 | |
| germ cell tumor | 29 / 263845 | 109 | |
| glioma | 17 / 106883 | 159 | |
| head and neck tumor | 1 / 136302 | 7 |  |
| kidney tumor | 5 / 68959 | 72 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 9 / 103127 | 87 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 102 / 3360307 | 30 | |
| ovarian tumor | 9 / 76682 | 117 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 14 / 124949 | 112 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 2 / 123478 | 16 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 45 / 1100989 | 40 | |
| cervix | 5 / 48171 | 103 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 18 / 211054 | 85 | |
| heart | 0 / 89626 | 0 | |
| intestine | 12 / 234472 | 51 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 1 / 24145 | 41 | |
| liver | 3 / 207743 | 14 | |
| lung | 17 / 336974 | 50 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 7 / 153271 | 45 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 12 / 102051 | 117 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 14 / 280825 | 49 | |
| prostate | 13 / 189345 | 68 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 17 / 210574 | 80 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 8 / 96619 | 82 | |
| testis | 21 / 330442 | 63 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 2 / 51780 | 38 | |
- Probe name: A_23_P398372
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.08 ± 0.52 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.68 ± 0.24 | |
| Basal Part of Pons | 6.38 ± 0.38 | |
| Cerebellar Cortex | 5.93 ± 0.33 | |
| Cerebellar Nuclei | 5.71 ± 0.58 | |
| Claustrum | 5.72 ± 0.65 | |
| Epithalamus | 5.21 ± 0.62 | |
| Frontal Lobe | 6.05 ± 0.46 | |
| Globus Pallidus | 4.59 ± 0.37 | |
| Hypothalamus | 5.19 ± 0.77 | |
| Insula | 6.12 ± 0.26 | |
| Limbic Lobe | 6.26 ± 0.45 | |
| Mesencephalon | 5.7 ± 0.47 | |
| Myelencephalon | 5.98 ± 0.55 | |
| Occipital Lobe | 6.05 ± 0.49 | |
| Parietal Lobe | 6.12 ± 0.51 | |
| Pontine Tegmentum | 5.88 ± 0.45 | |
| Striatum | 6.17 ± 0.51 | |
| Subthalamus | 5.73 ± 0.23 | |
| Temporal Lobe | 6.16 ± 0.45 | |
| Thalamus | 5.86 ± 0.36 | |
| White Matter | 4.67 ± 0.57 | |
Mouse Brain ISH 