AutismKB 2.0

Annotation Detail for DCAF15


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Basic Information Top
Gene Symbol:DCAF15 ( C19orf72,MGC99481 )
Gene Full Name: DDB1 and CUL4 associated factor 15
Band: 19p13.12
Quick LinksEntrez ID:90379; OMIM: NA; Uniprot ID:DCA15_HUMAN; ENSEMBL ID: ENSG00000132017; HGNC ID: 25095
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus23 / 56401240
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult48 / 193912124
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor4 / 11424635
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor11 / 26384541
glioma4 / 10688337
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia3 / 9584231
liver tumor0 / 963590 
lung tumor9 / 10312787
lymphoma1 / 7175513
non-neoplasia2 / 9725020
normal93 / 336030727
ovarian tumor6 / 7668278
pancreatic tumor15 / 104616143
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor4 / 12494932
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites2 / 4001549
bladder0 / 297570 
blood1 / 1234788
bone1 / 7165513
bone marrow3 / 4880161
brain11 / 11009899
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue7 / 21572232
esophagus0 / 202090 
eye8 / 21105437
heart3 / 8962633
intestine15 / 23447263
kidney5 / 21177723
larynx0 / 241450 
liver1 / 2077434
lung23 / 33697468
lymph1 / 4427022
lymph node5 / 9161054
mammary gland3 / 15327119
mouth0 / 670520 
muscle2 / 10771518
nerve0 / 157680 
ovary9 / 10205188
pancreas20 / 21481293
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta10 / 28082535
prostate5 / 18934526
salivary gland0 / 201550 
skin4 / 21057418
spleen4 / 5395274
stomach2 / 9661920
testis10 / 33044230
thymus1 / 8113112
thyroid1 / 4747321
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 91952_at
Cell line Expression level Expression bar
721_B_lymphoblasts21.25
Adipocyte4.25
AdrenalCortex4.65
Adrenalgland3.5
Amygdala4.6
Appendix4.35
AtrioventricularNode3.25
BDCA4+_DentriticCells11.05
Bonemarrow4.3
BronchialEpithelialCells4.35
CD105+_Endothelial9.4
CD14+_Monocytes14.6
CD19+_BCells(neg._sel.)11.8
CD33+_Myeloid14.15
CD34+9.9
CD4+_Tcells15.75
CD56+_NKCells15.25
CD71+_EarlyErythroid13.8
CD8+_Tcells12.7
CardiacMyocytes5.95
Caudatenucleus3.8
Cerebellum3.45
CerebellumPeduncles4.9
CiliaryGanglion3.05
CingulateCortex4.4
Colorectaladenocarcinoma6.25
DorsalRootGanglion3.35
FetalThyroid4.2
Fetalbrain4.25
Fetalliver3.75
Fetallung3.7
GlobusPallidus3.15
Heart5.7
Hypothalamus4.65
Kidney3.4
Leukemia_chronicMyelogenousK-5628.55
Leukemia_promyelocytic-HL-604.2
Leukemialymphoblastic(MOLT-4)9.65
Liver5.8
Lung7
Lymphnode3.7
Lymphoma_burkitts(Daudi)5.55
Lymphoma_burkitts(Raji)6.2
MedullaOblongata3.85
OccipitalLobe3.85
OlfactoryBulb3.35
Ovary2.9
Pancreas3.45
PancreaticIslet4.65
ParietalLobe4.55
Pituitary5
Placenta4.6
Pons4.1
PrefrontalCortex5.3
Prostate5.05
Salivarygland3.45
SkeletalMuscle5.35
Skin3.3
SmoothMuscle4.9
Spinalcord4.55
SubthalamicNucleus3.85
SuperiorCervicalGanglion5
TemporalLobe3.9
Testis5.2
TestisGermCell15.85
TestisIntersitial5
TestisLeydigCell5.3
TestisSeminiferousTubule5.5
Thalamus4.3
Thymus3.55
Thyroid5.6
Tongue4.25
Tonsil4.15
Trachea3.4
TrigeminalGanglion4.4
Uterus3.65
UterusCorpus3.95
WholeBlood6.45
Wholebrain3.75
colon4.3
pineal_day5.34
pineal_night5.2
retina5.25
small_intestine4.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_14087_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.84 ± 0.95
Basal Forebrain1.96 ± 0.31
Basal Part of Pons2.23 ± 0.74
Cerebellar Cortex3.02 ± 0.51
Cerebellar Nuclei2.34 ± 0.48
Claustrum2.85 ± 0.64
Epithalamus2.23 ± 0.77
Frontal Lobe2.39 ± 0.77
Globus Pallidus1.9 ± 0.72
Hypothalamus2.32 ± 0.59
Insula2.71 ± 0.84
Limbic Lobe2.56 ± 0.65
Mesencephalon2.47 ± 0.83
Myelencephalon2.46 ± 0.72
Occipital Lobe2.22 ± 0.59
Parietal Lobe2.28 ± 0.77
Pontine Tegmentum2.57 ± 0.67
Striatum2.11 ± 0.74
Subthalamus2.49 ± 0.62
Temporal Lobe2.62 ± 0.65
Thalamus2.2 ± 0.76
White Matter2.01 ± 0.43
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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