Annotation Detail for BMF
Basic Information Top
| Gene Symbol: | BMF ( FLJ00065 ) |
|---|---|
| Gene Full Name: | Bcl2 modifying factor |
| Band: | 15q15.1 |
| Quick Links | Entrez ID:90427; OMIM: 606266; Uniprot ID:BMF_HUMAN; ENSEMBL ID: ENSG00000104081; HGNC ID: 24132 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.591104
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 8 / 70761 | 113 |  |
| blastocyst | 4 / 62319 | 64 | |
| fetus | 4 / 564012 | 7 |  |
| neonate | 1 / 31097 | 32 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 37 / 1939121 | 19 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 14 / 71755 | 195 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 66 / 3360307 | 19 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 12 / 123478 | 97 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 6 / 1100989 | 5 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 17 / 215722 | 78 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 1 / 89626 | 11 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 4 / 24145 | 165 | |
| liver | 1 / 207743 | 4 | |
| lung | 9 / 336974 | 26 | |
| lymph | 13 / 44270 | 293 |  |
| lymph node | 8 / 91610 | 87 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 11 / 280825 | 39 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 7 / 210574 | 33 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_16778_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 1.88 ± 1.04 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.48 ± 0.27 | |
| Basal Part of Pons | 1.37 ± 0.65 | |
| Cerebellar Cortex | 1.36 ± 0.71 | |
| Cerebellar Nuclei | 1.84 ± 0.72 | |
| Claustrum | 2.43 ± 0.87 | |
| Epithalamus | 1.09 ± 0.74 | |
| Frontal Lobe | 1.39 ± 0.6 | |
| Globus Pallidus | 2.03 ± 0.42 | |
| Hypothalamus | 1.55 ± 0.65 | |
| Insula | 1.33 ± 0.45 | |
| Limbic Lobe | 1.55 ± 0.72 | |
| Mesencephalon | 1.71 ± 0.8 | |
| Myelencephalon | 1.67 ± 0.75 | |
| Occipital Lobe | 1.59 ± 0.67 | |
| Parietal Lobe | 1.57 ± 0.83 | |
| Pontine Tegmentum | 1.46 ± 0.63 | |
| Striatum | 1.86 ± 0.7 | |
| Subthalamus | 1.49 ± 0.62 | |
| Temporal Lobe | 1.44 ± 0.69 | |
| Thalamus | 1.65 ± 0.69 | |
| White Matter | 2.09 ± 0.35 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Bmf | CB | Cerebellum | 75.1 | |
| 100 | | |||
| Bmf | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Bmf | HIP | Hippocampal region | 78.18 | |
| 100 | | |||
| Bmf | HPF | Hippocampal formation | 84.26 | |
| 98.04 | | |||
| Bmf | HY | Hypothalamus | 82.18 | |
| 68.75 | | |||
| Bmf | LSX | Lateral septal complex | 100 | |
| 94.46 | | |||
| Bmf | MB | Midbrain | 90.57 | |
| 84.64 | | |||
| Bmf | MY | Medulla | 70.27 | |
| 71.04 | | |||
| Bmf | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Bmf | P | Pons | 70.59 | |
| 67.9 | | |||
| Bmf | PAL | Pallidum | 74.49 | |
| 65.58 | | |||
| Bmf | RHP | Retrohippocampal region | 95.02 | |
| 78.09 | | |||
| Bmf | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 78.14 | | |||
| Bmf | STR | Striatum | 100 | |
| 77.36 | | |||
| Bmf | STRd | Striatum dorsal region | 99.49 | |
| 74.25 | | |||
| Bmf | STRv | Striatum ventral region | 100 | |
| 82.18 | | |||
| Bmf | TH | Thalamus | 95.1 | |
| 81.35 | |