Annotation Detail for ERI1
Basic Information Top
| Gene Symbol: | ERI1 ( 3'HEXO,HEXO,MGC35395,THEX1 ) |
|---|---|
| Gene Full Name: | exoribonuclease 1 |
| Band: | 8p23.1 |
| Quick Links | Entrez ID:90459; OMIM: 608739; Uniprot ID:ERI1_HUMAN; ENSEMBL ID: ENSG00000104626; HGNC ID: 23994 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.20000
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 20 / 564012 | 35 | |
| neonate | 2 / 31097 | 64 |  |
| infant | 1 / 23620 | 42 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 66 / 1939121 | 34 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 13 / 263845 | 49 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 104 / 3360307 | 30 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 |  |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 8 / 125191 | 63 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 3 / 123478 | 24 | |
| bone | 6 / 71655 | 83 | |
| bone marrow | 5 / 48801 | 102 | |
| brain | 17 / 1100989 | 15 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 9 / 149255 | 60 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 1 / 89626 | 11 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 1 / 24145 | 41 | |
| liver | 3 / 207743 | 14 | |
| lung | 7 / 336974 | 20 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 17 / 91610 | 185 | |
| mammary gland | 7 / 153271 | 45 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 13 / 280825 | 46 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 6 / 210574 | 28 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 6 / 96619 | 62 | |
| testis | 20 / 330442 | 60 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 14 / 232878 | 60 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_23_P123466
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.73 ± 0.58 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.95 ± 0.17 | |
| Basal Part of Pons | 4.54 ± 0.36 | |
| Cerebellar Cortex | 4.62 ± 0.34 | |
| Cerebellar Nuclei | 4.74 ± 0.42 | |
| Claustrum | 4.6 ± 0.69 | |
| Epithalamus | 5.4 ± 0.42 | |
| Frontal Lobe | 4.48 ± 0.48 | |
| Globus Pallidus | 5.47 ± 0.5 | |
| Hypothalamus | 4.79 ± 0.43 | |
| Insula | 4.44 ± 0.29 | |
| Limbic Lobe | 4.58 ± 0.61 | |
| Mesencephalon | 4.74 ± 0.57 | |
| Myelencephalon | 4.66 ± 0.62 | |
| Occipital Lobe | 4.78 ± 0.48 | |
| Parietal Lobe | 4.71 ± 0.64 | |
| Pontine Tegmentum | 4.64 ± 0.58 | |
| Striatum | 5.16 ± 0.55 | |
| Subthalamus | 4.26 ± 0.44 | |
| Temporal Lobe | 4.57 ± 0.45 | |
| Thalamus | 4.63 ± 0.45 | |
| White Matter | 5.74 ± 0.38 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Thex1 | CB | Cerebellum | 0.82 | |
| 0.84 | | |||
| Thex1 | CTX | Cerebral cortex | 0.74 | |
| 0.58 | | |||
| Thex1 | HIP | Hippocampal region | 0.97 | |
| 0.72 | | |||
| Thex1 | HPF | Hippocampal formation | 0.68 | |
| 0.53 | | |||
| Thex1 | HY | Hypothalamus | 0.36 | |
| 0.31 | | |||
| Thex1 | LSX | Lateral septal complex | 0.21 | |
| 0.46 | | |||
| Thex1 | MB | Midbrain | 0.34 | |
| 0.46 | | |||
| Thex1 | MY | Medulla | 0.83 | |
| 0.93 | | |||
| Thex1 | OLF | Olfactory bulb | 1.42 | |
| 2.9 | | |||
| Thex1 | P | Pons | 0.69 | |
| 0.81 | | |||
| Thex1 | PAL | Pallidum | 0.19 | |
| 0.14 | | |||
| Thex1 | RHP | Retrohippocampal region | 0.22 | |
| 0.28 | | |||
| Thex1 | sAMY | Striatum-like amygdalar nuclei | 0.12 | |
| 0.22 | | |||
| Thex1 | STR | Striatum | 0.19 | |
| 0.2 | | |||
| Thex1 | STRd | Striatum dorsal region | 0.2 | |
| 0.2 | | |||
| Thex1 | STRv | Striatum ventral region | 0.12 | |
| 0.06 | | |||
| Thex1 | TH | Thalamus | 0.49 | |
| 0.48 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00072991 | 17 | 284 | 300 | LGMDYDGRPHCGLDDSK | Peptide Atlas |