Annotation Detail for COX19
Basic Information Top
| Gene Symbol: | COX19 ( MGC104475 ) |
|---|---|
| Gene Full Name: | COX19 cytochrome c oxidase assembly homolog (S. cerevisiae) |
| Band: | 7p22.3 |
| Quick Links | Entrez ID:90639; OMIM: 610429; Uniprot ID:COX19_HUMAN; ENSEMBL ID: ENSG00000105963; HGNC ID: 28074 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.121593
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 22 / 564012 | 39 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 41 / 1939121 | 21 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 10 / 119369 | 83 |  |
| germ cell tumor | 10 / 263845 | 37 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 91 / 3360307 | 27 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 35 / 1100989 | 31 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 7 / 211054 | 33 | |
| heart | 1 / 89626 | 11 | |
| intestine | 10 / 234472 | 42 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 9 / 207743 | 43 | |
| lung | 5 / 336974 | 14 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 4 / 53952 | 74 | |
| stomach | 6 / 96619 | 62 | |
| testis | 13 / 330442 | 39 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 6 / 52413 | 114 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_32_P9468
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.21 ± 0.51 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.29 ± 0.23 | |
| Basal Part of Pons | 6.46 ± 0.46 | |
| Cerebellar Cortex | 6.65 ± 0.26 | |
| Cerebellar Nuclei | 6.16 ± 0.52 | |
| Claustrum | 6.2 ± 0.63 | |
| Epithalamus | 5.68 ± 0.27 | |
| Frontal Lobe | 6.17 ± 0.43 | |
| Globus Pallidus | 5.49 ± 0.25 | |
| Hypothalamus | 6.16 ± 0.52 | |
| Insula | 6.33 ± 0.34 | |
| Limbic Lobe | 6.34 ± 0.47 | |
| Mesencephalon | 6.03 ± 0.51 | |
| Myelencephalon | 6.09 ± 0.52 | |
| Occipital Lobe | 6.17 ± 0.41 | |
| Parietal Lobe | 6.09 ± 0.43 | |
| Pontine Tegmentum | 6.12 ± 0.49 | |
| Striatum | 5.63 ± 0.43 | |
| Subthalamus | 5.9 ± 0.44 | |
| Temporal Lobe | 6.31 ± 0.47 | |
| Thalamus | 5.72 ± 0.48 | |
| White Matter | 6.71 ± 0.12 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2810437L13Rik | CB | Cerebellum | 18.66 | |
| 18.11 | | |||
| 2810437L13Rik | CTX | Cerebral cortex | 75.75 | |
| 33.5 | | |||
| 2810437L13Rik | HIP | Hippocampal region | 32.26 | |
| 27.85 | | |||
| 2810437L13Rik | HPF | Hippocampal formation | 31.12 | |
| 21.45 | | |||
| 2810437L13Rik | HY | Hypothalamus | 28.03 | |
| 10.39 | | |||
| 2810437L13Rik | LSX | Lateral septal complex | 29.17 | |
| 11.02 | | |||
| 2810437L13Rik | MB | Midbrain | 29.77 | |
| 13.9 | | |||
| 2810437L13Rik | MY | Medulla | 42.55 | |
| 28.08 | | |||
| 2810437L13Rik | OLF | Olfactory bulb | 57.45 | |
| 28.38 | | |||
| 2810437L13Rik | P | Pons | 42.46 | |
| 26.41 | | |||
| 2810437L13Rik | PAL | Pallidum | 30.06 | |
| 13.32 | | |||
| 2810437L13Rik | RHP | Retrohippocampal region | 28.78 | |
| 12.09 | | |||
| 2810437L13Rik | sAMY | Striatum-like amygdalar nuclei | 23.42 | |
| 8.86 | | |||
| 2810437L13Rik | STR | Striatum | 20.46 | |
| 6.89 | | |||
| 2810437L13Rik | STRd | Striatum dorsal region | 16.49 | |
| 5.31 | | |||
| 2810437L13Rik | STRv | Striatum ventral region | 28.37 | |
| 8.98 | | |||
| 2810437L13Rik | TH | Thalamus | 46.87 | |
| 19.26 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00423977 | 21 | 11 | 31 | SFQPRPPDKGSFPLDHLGECK | Peptide Atlas |