AutismKB 2.0

Annotation Detail for CLDN10


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:CLDN10 ( CPETRL3,OSP-L )
Gene Full Name: claudin 10
Band: 13q32.1
Quick LinksEntrez ID:9071; OMIM: NA; Uniprot ID:CLD10_HUMAN; ENSEMBL ID: ENSG00000134873; HGNC ID: 2033
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus12 / 56401221
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult27 / 193912113
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor1 / 1729057
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma5 / 10688346
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor1 / 9635910
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia2 / 9725020
normal71 / 336030721
ovarian tumor4 / 7668252
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood2 / 12347816
bone0 / 716550 
bone marrow0 / 488010 
brain30 / 110098927
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus1 / 2020949
eye0 / 2110540 
heart0 / 896260 
intestine1 / 2344724
kidney16 / 21177775
larynx0 / 241450 
liver3 / 20774314
lung2 / 3369745
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth1 / 6705214
muscle2 / 10771518
nerve0 / 157680 
ovary4 / 10205139
pancreas9 / 21481241
parathyroid0 / 205390 
pharynx4 / 4132896
pituitary gland0 / 165850 
placenta6 / 28082521
prostate1 / 1893455
salivary gland1 / 2015549
skin0 / 2105740 
spleen0 / 539520 
stomach1 / 9661910
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus5 / 23287821
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205328_at
Cell line Expression level Expression bar
721_B_lymphoblasts6
Adipocyte5.25
AdrenalCortex5.35
Adrenalgland4.35
Amygdala21.7
Appendix5.2
AtrioventricularNode4.25
BDCA4+_DentriticCells5.3
Bonemarrow5.45
BronchialEpithelialCells5.25
CD105+_Endothelial5.35
CD14+_Monocytes5.55
CD19+_BCells(neg._sel.)5.15
CD33+_Myeloid6.9
CD34+8.05
CD4+_Tcells5.65
CD56+_NKCells6.3
CD71+_EarlyErythroid4.95
CD8+_Tcells5.15
CardiacMyocytes6.5
Caudatenucleus6.35
Cerebellum8.55
CerebellumPeduncles7.45
CiliaryGanglion3.7
CingulateCortex9.65
Colorectaladenocarcinoma5.25
DorsalRootGanglion4.1
FetalThyroid5.2
Fetalbrain5.35
Fetalliver4.5
Fetallung4.35
GlobusPallidus6
Heart6.35
Hypothalamus7.95
Kidney150.65
Leukemia_chronicMyelogenousK-5624.75
Leukemia_promyelocytic-HL-604.65
Leukemialymphoblastic(MOLT-4)4.25
Liver6.8
Lung5.85
Lymphnode4.6
Lymphoma_burkitts(Daudi)6.65
Lymphoma_burkitts(Raji)7.2
MedullaOblongata8.9
OccipitalLobe12.05
OlfactoryBulb4.15
Ovary3.95
Pancreas57
PancreaticIslet148.95
ParietalLobe6.7
Pituitary6.2
Placenta5.5
Pons5.35
PrefrontalCortex13.7
Prostate6.15
Salivarygland107.05
SkeletalMuscle6
Skin5.7
SmoothMuscle5.8
Spinalcord6.05
SubthalamicNucleus6.75
SuperiorCervicalGanglion7.55
TemporalLobe8.45
Testis4.55
TestisGermCell4.45
TestisIntersitial4.45
TestisLeydigCell5.2
TestisSeminiferousTubule4.55
Thalamus7.4
Thymus4.2
Thyroid6
Tongue5.1
Tonsil37.55
Trachea23.4
TrigeminalGanglion7.45
Uterus4.35
UterusCorpus5.55
WholeBlood5.8
Wholebrain91.55
colon5.15
pineal_day6.64
pineal_night6.46
retina7.45
small_intestine5.05
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P48350
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.42 ± 0.41
Basal Forebrain8.04 ± 0.17
Basal Part of Pons7.12 ± 0.72
Cerebellar Cortex7.02 ± 0.28
Cerebellar Nuclei6.5 ± 0.67
Claustrum7 ± 1.02
Epithalamus7.59 ± 0.51
Frontal Lobe7.74 ± 0.64
Globus Pallidus8.24 ± 0.41
Hypothalamus7.69 ± 0.35
Insula7.79 ± 0.48
Limbic Lobe7.58 ± 0.73
Mesencephalon7.77 ± 0.64
Myelencephalon7.69 ± 0.68
Occipital Lobe8 ± 0.38
Parietal Lobe8.04 ± 0.61
Pontine Tegmentum7.97 ± 0.45
Striatum7.92 ± 0.57
Subthalamus7.16 ± 0.32
Temporal Lobe7.78 ± 0.55
Thalamus8 ± 0.52
White Matter5.88 ± 0.19
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Cldn10CBCerebellum0
0
Cldn10CTXCerebral cortex0
0
Cldn10HIPHippocampal region0
0
Cldn10HPFHippocampal formation0
0
Cldn10HYHypothalamus0
0
Cldn10LSXLateral septal complex0
0
Cldn10MBMidbrain0
0
Cldn10MYMedulla0
0
Cldn10OLFOlfactory bulb0
0
Cldn10PPons0
0
Cldn10PALPallidum0
0
Cldn10RHPRetrohippocampal region0
0
Cldn10sAMYStriatum-like amygdalar nuclei0
0
Cldn10STRStriatum0
0
Cldn10STRdStriatum dorsal region0
0
Cldn10STRvStriatum ventral region0
0
Cldn10THThalamus0
0
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved