Annotation Detail for ZNF598
Basic Information Top
| Gene Symbol: | ZNF598 ( DKFZp762F135,FLJ00086 ) |
|---|---|
| Gene Full Name: | zinc finger protein 598 |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:90850; OMIM: NA; Uniprot ID:ZN598_HUMAN; ENSEMBL ID: ENSG00000167962; HGNC ID: 28079 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.343828
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 3 / 62319 | 48 | |
| fetus | 13 / 564012 | 23 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 68 / 1939121 | 35 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 8 / 34366 | 232 |  |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 10 / 119369 | 83 | |
| germ cell tumor | 14 / 263845 | 53 | |
| glioma | 12 / 106883 | 112 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 13 / 103127 | 126 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 77 / 3360307 | 22 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 6 / 104616 | 57 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 7 / 46356 | 151 | |
| skin tumor | 19 / 124949 | 152 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 8 / 90257 | 88 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 6 / 40015 | 149 | |
| bladder | 1 / 29757 | 33 | |
| blood | 5 / 123478 | 40 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 23 / 1100989 | 20 | |
| cervix | 8 / 48171 | 166 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 20 / 211054 | 94 | |
| heart | 4 / 89626 | 44 | |
| intestine | 11 / 234472 | 46 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 1 / 24145 | 41 | |
| liver | 2 / 207743 | 9 | |
| lung | 25 / 336974 | 74 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 9 / 280825 | 32 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 20 / 210574 | 94 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 4 / 96619 | 41 | |
| testis | 4 / 330442 | 12 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 14 / 232878 | 60 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_2303_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.54 ± 1.16 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.88 ± 0.56 | |
| Basal Part of Pons | 1.97 ± 0.78 | |
| Cerebellar Cortex | 1.72 ± 0.73 | |
| Cerebellar Nuclei | 2.43 ± 0.51 | |
| Claustrum | 2.61 ± 0.9 | |
| Epithalamus | 1.47 ± 0.77 | |
| Frontal Lobe | 1.92 ± 0.94 | |
| Globus Pallidus | 3.02 ± 0.63 | |
| Hypothalamus | 1.87 ± 1.12 | |
| Insula | 1.96 ± 0.77 | |
| Limbic Lobe | 2.08 ± 0.93 | |
| Mesencephalon | 2.18 ± 0.95 | |
| Myelencephalon | 2.05 ± 0.86 | |
| Occipital Lobe | 2.1 ± 1.07 | |
| Parietal Lobe | 2.17 ± 0.95 | |
| Pontine Tegmentum | 2.2 ± 1.01 | |
| Striatum | 2.6 ± 1.02 | |
| Subthalamus | 1.91 ± 0.96 | |
| Temporal Lobe | 2.04 ± 0.95 | |
| Thalamus | 1.94 ± 0.78 | |
| White Matter | 2.07 ± 0.49 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Zfp598 | CB | Cerebellum | 88.18 | |
| 100 | | |||
| Zfp598 | CTX | Cerebral cortex | 85.42 | |
| 62.02 | | |||
| Zfp598 | HIP | Hippocampal region | 51.32 | |
| 64.4 | | |||
| Zfp598 | HPF | Hippocampal formation | 60.84 | |
| 63.61 | | |||
| Zfp598 | HY | Hypothalamus | 93.82 | |
| 72.65 | | |||
| Zfp598 | LSX | Lateral septal complex | 100 | |
| 76.63 | | |||
| Zfp598 | MB | Midbrain | 72.53 | |
| 58.9 | | |||
| Zfp598 | MY | Medulla | 76.96 | |
| 79.6 | | |||
| Zfp598 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Zfp598 | P | Pons | 78.06 | |
| 74.92 | | |||
| Zfp598 | PAL | Pallidum | 73.55 | |
| 63.9 | | |||
| Zfp598 | RHP | Retrohippocampal region | 85.15 | |
| 65.38 | | |||
| Zfp598 | sAMY | Striatum-like amygdalar nuclei | 77.43 | |
| 57.73 | | |||
| Zfp598 | STR | Striatum | 79.85 | |
| 57.71 | | |||
| Zfp598 | STRd | Striatum dorsal region | 68.69 | |
| 46.74 | | |||
| Zfp598 | STRv | Striatum ventral region | 100 | |
| 83.66 | | |||
| Zfp598 | TH | Thalamus | 83.09 | |
| 64.46 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00009691 | 11 | 247 | 257 | CSTEQFTHAFR | Peptide Atlas |