AutismKB 2.0

Annotation Detail for DNAJA3


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Basic Information Top
Gene Symbol:DNAJA3 ( FLJ45758,TID1,hTid-1 )
Gene Full Name: DnaJ (Hsp40) homolog, subfamily A, member 3
Band: 16p13.3
Quick LinksEntrez ID:9093; OMIM: 608382; Uniprot ID:DNJA3_HUMAN; ENSEMBL ID: ENSG00000103423; HGNC ID: 11808
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst5 / 6231980
fetus23 / 56401240
neonate0 / 310970 
infant1 / 2362042
juvenile6 / 55556107
adult101 / 193912152
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor11 / 94178116
cervical tumor4 / 34366116
chondrosarcoma8 / 8282396
colorectal tumor14 / 114246122
esophageal tumor5 / 17290289
gastrointestinal tumor11 / 11936992
germ cell tumor29 / 263845109
glioma13 / 106883121
head and neck tumor14 / 136302102
kidney tumor3 / 6895943
leukemia7 / 9584273
liver tumor5 / 9635951
lung tumor12 / 103127116
lymphoma5 / 7175569
non-neoplasia4 / 9725041
normal206 / 336030761
ovarian tumor8 / 76682104
pancreatic tumor7 / 10461666
primitive neuroectodermal tumor of the CNS16 / 125680127
prostate cancer8 / 10268077
retinoblastoma2 / 4635643
skin tumor11 / 12494988
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites6 / 40015149
bladder2 / 2975767
blood10 / 12347880
bone5 / 7165569
bone marrow3 / 4880161
brain129 / 1100989117
cervix4 / 4817183
connective tissue8 / 14925553
ear0 / 162120 
embryonic tissue12 / 21572255
esophagus5 / 20209247
eye5 / 21105423
heart3 / 8962633
intestine19 / 23447281
kidney10 / 21177747
larynx0 / 241450 
liver8 / 20774338
lung17 / 33697450
lymph3 / 4427067
lymph node3 / 9161032
mammary gland14 / 15327191
mouth8 / 67052119
muscle11 / 107715102
nerve2 / 15768126
ovary11 / 102051107
pancreas11 / 21481251
parathyroid0 / 205390 
pharynx2 / 4132848
pituitary gland0 / 165850 
placenta14 / 28082549
prostate10 / 18934552
salivary gland4 / 20155198
skin16 / 21057475
spleen3 / 5395255
stomach6 / 9661962
testis21 / 33044263
thymus4 / 8113149
thyroid3 / 4747363
tonsil1 / 1699958
trachea1 / 5241319
umbilical cord0 / 136800 
uterus6 / 23287825
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205963_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts246.6
Adipocyte28.2
AdrenalCortex35.4
Adrenalgland55.25
Amygdala31.3
Appendix9.8
AtrioventricularNode10.05
BDCA4+_DentriticCells50.6
Bonemarrow27.65
BronchialEpithelialCells52.2
CD105+_Endothelial56.3
CD14+_Monocytes26.4
CD19+_BCells(neg._sel.)45.65
CD33+_Myeloid28.6
CD34+59.75
CD4+_Tcells108.25
CD56+_NKCells41.5
CD71+_EarlyErythroid55.25
CD8+_Tcells86.6
CardiacMyocytes19.8
Caudatenucleus28.2
Cerebellum26.35
CerebellumPeduncles46.65
CiliaryGanglion15.6
CingulateCortex30.5
Colorectaladenocarcinoma36.65
DorsalRootGanglion11.05
FetalThyroid29.75
Fetalbrain24
Fetalliver30.1
Fetallung20.2
GlobusPallidus19.5
Heart93.35
Hypothalamus41.25
Kidney33
Leukemia_chronicMyelogenousK-562106.5
Leukemia_promyelocytic-HL-60118
Leukemialymphoblastic(MOLT-4)41.15
Liver124
Lung28.95
Lymphnode27.85
Lymphoma_burkitts(Daudi)61.15
Lymphoma_burkitts(Raji)132.25
MedullaOblongata22.55
OccipitalLobe31
OlfactoryBulb18.7
Ovary12.95
Pancreas21.5
PancreaticIslet39.2
ParietalLobe24.6
Pituitary41.25
Placenta34.35
Pons22.4
PrefrontalCortex35.1
Prostate35.35
Salivarygland32.3
SkeletalMuscle39.1
Skin14.25
SmoothMuscle23.95
Spinalcord38.6
SubthalamicNucleus24.4
SuperiorCervicalGanglion14.6
TemporalLobe24.55
Testis55.15
TestisGermCell33.7
TestisIntersitial27.25
TestisLeydigCell33.15
TestisSeminiferousTubule31.75
Thalamus34.85
Thymus25.65
Thyroid41.9
Tongue26.7
Tonsil26.7
Trachea25.15
TrigeminalGanglion24.8
Uterus22.35
UterusCorpus23.85
WholeBlood14.5
Wholebrain67.35
colon30.3
pineal_day48.92
pineal_night48.16
retina38.2
small_intestine31.35
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6899_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.95 ± 0.58
Basal Forebrain4.67 ± 0.43
Basal Part of Pons4.45 ± 0.67
Cerebellar Cortex4.21 ± 0.42
Cerebellar Nuclei4.66 ± 0.34
Claustrum5.03 ± 0.75
Epithalamus3.92 ± 0.47
Frontal Lobe4.43 ± 0.49
Globus Pallidus5.1 ± 0.39
Hypothalamus4.15 ± 0.43
Insula4.4 ± 0.39
Limbic Lobe4.95 ± 0.5
Mesencephalon4.67 ± 0.45
Myelencephalon4.6 ± 0.58
Occipital Lobe4.89 ± 0.62
Parietal Lobe4.63 ± 0.56
Pontine Tegmentum4.52 ± 0.48
Striatum4.95 ± 0.46
Subthalamus4.27 ± 0.64
Temporal Lobe4.55 ± 0.56
Thalamus4.45 ± 0.48
White Matter5.46 ± 0.71
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Dnaja3CBCerebellum33.68
70.08
Dnaja3CTXCerebral cortex100
100
Dnaja3HIPHippocampal region80.08
100
Dnaja3HPFHippocampal formation85.81
100
Dnaja3HYHypothalamus78
73.86
Dnaja3LSXLateral septal complex73.95
65.5
Dnaja3MBMidbrain68.25
72.33
Dnaja3MYMedulla39.84
60.49
Dnaja3OLFOlfactory bulb75.86
83.11
Dnaja3PPons46.83
64.11
Dnaja3PALPallidum72.28
79.26
Dnaja3RHPRetrohippocampal region100
92.61
Dnaja3sAMYStriatum-like amygdalar nuclei100
88.7
Dnaja3STRStriatum74.64
63.1
Dnaja3STRdStriatum dorsal region67.28
55.85
Dnaja3STRvStriatum ventral region83.9
71
Dnaja3THThalamus79.5
80.92
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00069088 16 223 238 GVNKEFTVNIMDTCER Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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