Annotation Detail for ACBD5
Basic Information Top
| Gene Symbol: | ACBD5 ( DKFZp434A2417,KIAA1996 ) |
|---|---|
| Gene Full Name: | acyl-CoA binding domain containing 5 |
| Band: | 10p12.1 |
| Quick Links | Entrez ID:91452; OMIM: NA; Uniprot ID:ACBD5_HUMAN; ENSEMBL ID: ENSG00000107897; HGNC ID: 23338 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.530597
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 19 / 564012 | 33 | |
| neonate | 1 / 31097 | 32 | |
| infant | 3 / 23620 | 127 |  |
| juvenile | 0 / 55556 | 0 | |
| adult | 53 / 1939121 | 27 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 1 / 263845 | 3 |  |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 113 / 3360307 | 33 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 5 / 90257 | 55 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 1 / 29757 | 33 | |
| blood | 2 / 123478 | 16 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 78 / 1100989 | 70 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 11 / 211054 | 52 | |
| heart | 2 / 89626 | 22 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 8 / 336974 | 23 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 10 / 280825 | 35 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 16 / 330442 | 48 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 12 / 52413 | 228 |  |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 13 / 232878 | 55 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P97795
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.46 ± 0.18 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 9.92 ± 0.29 | |
| Basal Part of Pons | 9.51 ± 0.17 | |
| Cerebellar Cortex | 9.34 ± 0.16 | |
| Cerebellar Nuclei | 9.88 ± 0.23 | |
| Claustrum | 9.53 ± 0.27 | |
| Epithalamus | 9.93 ± 0.27 | |
| Frontal Lobe | 9.59 ± 0.35 | |
| Globus Pallidus | 10.59 ± 0.21 | |
| Hypothalamus | 9.61 ± 0.36 | |
| Insula | 9.51 ± 0.26 | |
| Limbic Lobe | 9.42 ± 0.42 | |
| Mesencephalon | 9.72 ± 0.29 | |
| Myelencephalon | 9.68 ± 0.3 | |
| Occipital Lobe | 9.78 ± 0.36 | |
| Parietal Lobe | 9.64 ± 0.28 | |
| Pontine Tegmentum | 9.68 ± 0.34 | |
| Striatum | 9.78 ± 0.31 | |
| Subthalamus | 9.74 ± 0.09 | |
| Temporal Lobe | 9.5 ± 0.25 | |
| Thalamus | 9.84 ± 0.27 | |
| White Matter | 10.67 ± 0.18 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Acbd5 | CB | Cerebellum | 15.24 | |
| 17.69 | | |||
| Acbd5 | CTX | Cerebral cortex | 13.76 | |
| 10.43 | | |||
| Acbd5 | HIP | Hippocampal region | 16.97 | |
| 17.12 | | |||
| Acbd5 | HPF | Hippocampal formation | 13.77 | |
| 12.6 | | |||
| Acbd5 | HY | Hypothalamus | 2.17 | |
| 1.66 | | |||
| Acbd5 | LSX | Lateral septal complex | 3.41 | |
| 2.29 | | |||
| Acbd5 | MB | Midbrain | 5.11 | |
| 5.3 | | |||
| Acbd5 | MY | Medulla | 12.63 | |
| 14.13 | | |||
| Acbd5 | OLF | Olfactory bulb | 16.44 | |
| 12.09 | | |||
| Acbd5 | P | Pons | 4.81 | |
| 5.24 | | |||
| Acbd5 | PAL | Pallidum | 5 | |
| 5.01 | | |||
| Acbd5 | RHP | Retrohippocampal region | 8.88 | |
| 6.69 | | |||
| Acbd5 | sAMY | Striatum-like amygdalar nuclei | 2.24 | |
| 1.71 | | |||
| Acbd5 | STR | Striatum | 7.88 | |
| 5.58 | | |||
| Acbd5 | STRd | Striatum dorsal region | 9.49 | |
| 6.86 | | |||
| Acbd5 | STRv | Striatum ventral region | 6.72 | |
| 4.39 | | |||
| Acbd5 | TH | Thalamus | 8.22 | |
| 7.36 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00037931 | 17 | 218 | 234 | STEEVKPIDENLGQTGK | Peptide Atlas |