AutismKB 2.0

Annotation Detail for RSAD2


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Basic Information Top
Gene Symbol:RSAD2 ( 2510004L01Rik,cig33,cig5,vig1 )
Gene Full Name: radical S-adenosyl methionine domain containing 2
Band: 2p25.2
Quick LinksEntrez ID:91543; OMIM: 607810; Uniprot ID:RSAD2_HUMAN; ENSEMBL ID: ENSG00000134321; HGNC ID: 30908
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus5 / 5640128
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult45 / 193912123
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor3 / 17290173
gastrointestinal tumor5 / 11936941
germ cell tumor6 / 26384522
glioma0 / 1068830 
head and neck tumor3 / 13630222
kidney tumor0 / 689590 
leukemia2 / 9584220
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia2 / 9725020
normal85 / 336030725
ovarian tumor0 / 766820 
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer3 / 10268029
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites0 / 400150 
bladder2 / 2975767
blood15 / 123478121
bone0 / 716550 
bone marrow2 / 4880140
brain13 / 110098911
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus3 / 20209148
eye3 / 21105414
heart1 / 8962611
intestine2 / 2344728
kidney0 / 2117770 
larynx0 / 241450 
liver2 / 2077439
lung32 / 33697494
lymph0 / 442700 
lymph node3 / 9161032
mammary gland1 / 1532716
mouth5 / 6705274
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas6 / 21481227
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta7 / 28082524
prostate3 / 18934515
salivary gland0 / 201550 
skin0 / 2105740 
spleen1 / 5395218
stomach5 / 9661951
testis5 / 33044215
thymus2 / 8113124
thyroid0 / 474730 
tonsil0 / 169990 
trachea9 / 52413171
umbilical cord0 / 136800 
uterus9 / 23287838
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213797_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.75
Adipocyte4.85
AdrenalCortex6.6
Adrenalgland4.2
Amygdala5.05
Appendix5.95
AtrioventricularNode4.35
BDCA4+_DentriticCells6.5
Bonemarrow5.15
BronchialEpithelialCells4.7
CD105+_Endothelial5.3
CD14+_Monocytes5.75
CD19+_BCells(neg._sel.)5.15
CD33+_Myeloid9.75
CD34+6.25
CD4+_Tcells5.35
CD56+_NKCells5.9
CD71+_EarlyErythroid303.15
CD8+_Tcells5.4
CardiacMyocytes7.2
Caudatenucleus4.4
Cerebellum4
CerebellumPeduncles5.6
CiliaryGanglion6.8
CingulateCortex5.05
Colorectaladenocarcinoma4.95
DorsalRootGanglion4.95
FetalThyroid4.8
Fetalbrain4.8
Fetalliver4.35
Fetallung3.8
GlobusPallidus4.05
Heart7.05
Hypothalamus5.3
Kidney4.05
Leukemia_chronicMyelogenousK-5624.4
Leukemia_promyelocytic-HL-604.35
Leukemialymphoblastic(MOLT-4)3.8
Liver6.7
Lung5.35
Lymphnode4.25
Lymphoma_burkitts(Daudi)15.3
Lymphoma_burkitts(Raji)7.05
MedullaOblongata4.45
OccipitalLobe4.4
OlfactoryBulb3.85
Ovary3.45
Pancreas4.25
PancreaticIslet5.3
ParietalLobe5.3
Pituitary5.75
Placenta4.85
Pons4.8
PrefrontalCortex6
Prostate5.7
Salivarygland4.1
SkeletalMuscle6.9
Skin5.35
SmoothMuscle5.5
Spinalcord5.2
SubthalamicNucleus4.55
SuperiorCervicalGanglion6.6
TemporalLobe4.5
Testis4.2
TestisGermCell4.05
TestisIntersitial4.1
TestisLeydigCell4.85
TestisSeminiferousTubule4.15
Thalamus5
Thymus3.75
Thyroid6.05
Tongue5.05
Tonsil4.8
Trachea4.05
TrigeminalGanglion5.4
Uterus3.9
UterusCorpus4.8
WholeBlood5.45
Wholebrain3.95
colon4.9
pineal_day5.98
pineal_night5.92
retina5.9
small_intestine4.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P316965
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.66 ± 0.67
Basal Forebrain4.84 ± 0.42
Basal Part of Pons3.79 ± 0.37
Cerebellar Cortex3.92 ± 0.44
Cerebellar Nuclei4.99 ± 0.6
Claustrum4.95 ± 0.74
Epithalamus5.75 ± 0.47
Frontal Lobe4.46 ± 0.67
Globus Pallidus5.89 ± 0.32
Hypothalamus4.56 ± 0.68
Insula4.56 ± 0.43
Limbic Lobe4.82 ± 0.62
Mesencephalon4.77 ± 0.67
Myelencephalon4.88 ± 0.87
Occipital Lobe5.38 ± 0.69
Parietal Lobe4.84 ± 0.64
Pontine Tegmentum5.07 ± 0.73
Striatum6.06 ± 0.48
Subthalamus4.57 ± 0.73
Temporal Lobe4.57 ± 0.66
Thalamus4.69 ± 0.6
White Matter4.9 ± 0.98
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rsad2CBCerebellum2.01
2.99
Rsad2CTXCerebral cortex2.4
2.21
Rsad2HIPHippocampal region1.32
1.85
Rsad2HPFHippocampal formation1.05
1.46
Rsad2HYHypothalamus0.45
0.82
Rsad2LSXLateral septal complex1.88
1.64
Rsad2MBMidbrain1.07
1.79
Rsad2MYMedulla2.84
3.55
Rsad2OLFOlfactory bulb4.49
4.06
Rsad2PPons1.22
1.64
Rsad2PALPallidum0.73
0.82
Rsad2RHPRetrohippocampal region0.67
0.99
Rsad2sAMYStriatum-like amygdalar nuclei4.87
3.15
Rsad2STRStriatum1.41
1.18
Rsad2STRdStriatum dorsal region1.17
1.08
Rsad2STRvStriatum ventral region0.61
0.61
Rsad2THThalamus0.91
1.18
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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