Annotation Detail for C12orf65
Basic Information Top
| Gene Symbol: | C12orf65 ( FLJ38663 ) |
|---|---|
| Gene Full Name: | chromosome 12 open reading frame 65 |
| Band: | 12q24.31 |
| Quick Links | Entrez ID:91574; OMIM: 613541; Uniprot ID:CL065_HUMAN; ENSEMBL ID: ENSG00000130921; HGNC ID: 26784 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.319128
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 24 / 564012 | 42 | |
| neonate | 0 / 31097 | 0 | |
| infant | 2 / 23620 | 84 |  |
| juvenile | 0 / 55556 | 0 | |
| adult | 28 / 1939121 | 14 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 72 / 3360307 | 21 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 4 / 123478 | 32 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 18 / 1100989 | 16 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 2 / 89626 | 22 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 16 / 211777 | 75 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 8 / 336974 | 23 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 4 / 41328 | 96 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 5 / 210574 | 23 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 8 / 330442 | 24 | |
| thymus | 6 / 81131 | 73 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P339003
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.01 ± 0.62 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.13 ± 0.16 | |
| Basal Part of Pons | 6.49 ± 0.22 | |
| Cerebellar Cortex | 6.47 ± 0.13 | |
| Cerebellar Nuclei | 6.05 ± 0.29 | |
| Claustrum | 6.38 ± 0.37 | |
| Epithalamus | 6.22 ± 0.23 | |
| Frontal Lobe | 6.26 ± 0.34 | |
| Globus Pallidus | 5.81 ± 0.22 | |
| Hypothalamus | 6.58 ± 0.21 | |
| Insula | 6.33 ± 0.25 | |
| Limbic Lobe | 6.35 ± 0.28 | |
| Mesencephalon | 6.17 ± 0.35 | |
| Myelencephalon | 6.24 ± 0.34 | |
| Occipital Lobe | 6.29 ± 0.31 | |
| Parietal Lobe | 6.28 ± 0.29 | |
| Pontine Tegmentum | 6.22 ± 0.3 | |
| Striatum | 5.84 ± 0.43 | |
| Subthalamus | 6.2 ± 0.07 | |
| Temporal Lobe | 6.38 ± 0.25 | |
| Thalamus | 6.17 ± 0.28 | |
| White Matter | 5.85 ± 0.21 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2810006K23Rik | CB | Cerebellum | 1.86 | |
| 3.18 | | |||
| 2810006K23Rik | CTX | Cerebral cortex | 0.3 | |
| 0.43 | | |||
| 2810006K23Rik | HIP | Hippocampal region | 0.35 | |
| 0.55 | | |||
| 2810006K23Rik | HPF | Hippocampal formation | 0.27 | |
| 0.38 | | |||
| 2810006K23Rik | HY | Hypothalamus | 0.19 | |
| 0.33 | | |||
| 2810006K23Rik | LSX | Lateral septal complex | 0.22 | |
| 0.2 | | |||
| 2810006K23Rik | MB | Midbrain | 2.47 | |
| 3.6 | | |||
| 2810006K23Rik | MY | Medulla | 2.41 | |
| 3.52 | | |||
| 2810006K23Rik | OLF | Olfactory bulb | 0.58 | |
| 1.09 | | |||
| 2810006K23Rik | P | Pons | 0.92 | |
| 1.45 | | |||
| 2810006K23Rik | PAL | Pallidum | 0.13 | |
| 0.15 | | |||
| 2810006K23Rik | RHP | Retrohippocampal region | 0.16 | |
| 0.18 | | |||
| 2810006K23Rik | sAMY | Striatum-like amygdalar nuclei | 0.06 | |
| 0.1 | | |||
| 2810006K23Rik | STR | Striatum | 0.16 | |
| 0.16 | | |||
| 2810006K23Rik | STRd | Striatum dorsal region | 0.12 | |
| 0.11 | | |||
| 2810006K23Rik | STRv | Striatum ventral region | 0.3 | |
| 0.31 | | |||
| 2810006K23Rik | TH | Thalamus | 0.23 | |
| 0.28 | |