Annotation Detail for ZNF830
Basic Information Top
| Gene Symbol: | ZNF830 ( CCDC16,MGC20398,OMCG1,SEL13 ) |
|---|---|
| Gene Full Name: | zinc finger protein 830 |
| Band: | 17q12 |
| Quick Links | Entrez ID:91603; OMIM: NA; Uniprot ID:ZN830_HUMAN; ENSEMBL ID: ENSG00000198783; HGNC ID: 28291 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.413678
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 21 / 564012 | 37 | |
| neonate | 0 / 31097 | 0 | |
| infant | 4 / 23620 | 169 |  |
| juvenile | 1 / 55556 | 17 | |
| adult | 32 / 1939121 | 16 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 7 / 119369 | 58 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 76 / 3360307 | 22 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 8 / 125680 | 63 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 10 / 1100989 | 9 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 4 / 211054 | 18 | |
| heart | 1 / 89626 | 11 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 9 / 211777 | 42 | |
| larynx | 2 / 24145 | 82 | |
| liver | 0 / 207743 | 0 | |
| lung | 14 / 336974 | 41 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 13 / 91610 | 141 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 6 / 210574 | 28 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 0 / 96619 | 0 | |
| testis | 6 / 330442 | 18 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_4929_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.58 ± 0.26 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.38 ± 0.15 | |
| Basal Part of Pons | 7.34 ± 0.14 | |
| Cerebellar Cortex | 7.58 ± 0.18 | |
| Cerebellar Nuclei | 7.23 ± 0.22 | |
| Claustrum | 7.58 ± 0.32 | |
| Epithalamus | 7.17 ± 0.29 | |
| Frontal Lobe | 7.25 ± 0.26 | |
| Globus Pallidus | 7.45 ± 0.24 | |
| Hypothalamus | 7.1 ± 0.24 | |
| Insula | 7.25 ± 0.26 | |
| Limbic Lobe | 7.46 ± 0.28 | |
| Mesencephalon | 7.32 ± 0.26 | |
| Myelencephalon | 7.33 ± 0.31 | |
| Occipital Lobe | 7.64 ± 0.3 | |
| Parietal Lobe | 7.41 ± 0.24 | |
| Pontine Tegmentum | 7.37 ± 0.23 | |
| Striatum | 7.33 ± 0.24 | |
| Subthalamus | 7.2 ± 0.05 | |
| Temporal Lobe | 7.36 ± 0.24 | |
| Thalamus | 7.3 ± 0.23 | |
| White Matter | 7.91 ± 0.31 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ccdc16 | CB | Cerebellum | 0.31 | |
| 0.67 | | |||
| Ccdc16 | CTX | Cerebral cortex | 0.2 | |
| 0.22 | | |||
| Ccdc16 | HIP | Hippocampal region | 0.13 | |
| 0.13 | | |||
| Ccdc16 | HPF | Hippocampal formation | 0.4 | |
| 0.33 | | |||
| Ccdc16 | HY | Hypothalamus | 0.16 | |
| 0.13 | | |||
| Ccdc16 | LSX | Lateral septal complex | 0.22 | |
| 0.28 | | |||
| Ccdc16 | MB | Midbrain | 0.18 | |
| 0.28 | | |||
| Ccdc16 | MY | Medulla | 0.39 | |
| 0.47 | | |||
| Ccdc16 | OLF | Olfactory bulb | 0.57 | |
| 1.08 | | |||
| Ccdc16 | P | Pons | 0.37 | |
| 0.4 | | |||
| Ccdc16 | PAL | Pallidum | 0.07 | |
| 0.06 | | |||
| Ccdc16 | RHP | Retrohippocampal region | 0.83 | |
| 0.6 | | |||
| Ccdc16 | sAMY | Striatum-like amygdalar nuclei | 0.08 | |
| 0.06 | | |||
| Ccdc16 | STR | Striatum | 0.11 | |
| 0.1 | | |||
| Ccdc16 | STRd | Striatum dorsal region | 0.1 | |
| 0.09 | | |||
| Ccdc16 | STRv | Striatum ventral region | 0.11 | |
| 0.13 | | |||
| Ccdc16 | TH | Thalamus | 0.21 | |
| 0.17 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00514175 | 23 | 344 | 366 | KEEENADSDDEGELQDLLSQDWR | Peptide Atlas |
| ZN830_HUMAN_0 | 0 | 0 | 0 | LKEILTIKELQK | PRIDE |