AutismKB 2.0

Annotation Detail for ZNF804A


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:ZNF804A ( C2orf10 )
Gene Full Name: zinc finger protein 804A
Band: 2q32.1
Quick LinksEntrez ID:91752; OMIM: 612282; Uniprot ID:Z804A_HUMAN; ENSEMBL ID: ENSG00000170396; HGNC ID: 21711
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus9 / 56401215
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult9 / 19391214
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor3 / 26384511
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor2 / 9635920
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal19 / 33603075
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone1 / 7165513
bone marrow0 / 488010 
brain12 / 110098910
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye2 / 2110549
heart0 / 896260 
intestine0 / 2344720 
kidney1 / 2117774
larynx0 / 241450 
liver2 / 2077439
lung2 / 3369745
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 215767_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.45
Adipocyte6.4
AdrenalCortex8
Adrenalgland5.9
Amygdala13
Appendix9.95
AtrioventricularNode8
BDCA4+_DentriticCells6.45
Bonemarrow7.2
BronchialEpithelialCells6.05
CD105+_Endothelial6.4
CD14+_Monocytes7.1
CD19+_BCells(neg._sel.)7
CD33+_Myeloid8.35
CD34+8.5
CD4+_Tcells6.6
CD56+_NKCells7.25
CD71+_EarlyErythroid6.3
CD8+_Tcells5.85
CardiacMyocytes10.6
Caudatenucleus5.95
Cerebellum5.55
CerebellumPeduncles8.65
CiliaryGanglion8.15
CingulateCortex7.35
Colorectaladenocarcinoma6.5
DorsalRootGanglion7.45
FetalThyroid6.65
Fetalbrain10.8
Fetalliver6
Fetallung4.8
GlobusPallidus6.6
Heart10.3
Hypothalamus7.6
Kidney6.55
Leukemia_chronicMyelogenousK-5625.95
Leukemia_promyelocytic-HL-608.1
Leukemialymphoblastic(MOLT-4)5.05
Liver9.85
Lung7.15
Lymphnode5.35
Lymphoma_burkitts(Daudi)26.2
Lymphoma_burkitts(Raji)10
MedullaOblongata6.6
OccipitalLobe6.25
OlfactoryBulb5.15
Ovary5.55
Pancreas5.55
PancreaticIslet7.15
ParietalLobe7.75
Pituitary7.7
Placenta6.3
Pons6.95
PrefrontalCortex8.25
Prostate8
Salivarygland5.75
SkeletalMuscle9.4
Skin7
SmoothMuscle7.6
Spinalcord7.05
SubthalamicNucleus11.45
SuperiorCervicalGanglion11
TemporalLobe6.4
Testis5.65
TestisGermCell5.1
TestisIntersitial5.8
TestisLeydigCell6.9
TestisSeminiferousTubule5.85
Thalamus7.1
Thymus4.9
Thyroid7.9
Tongue8.1
Tonsil6.75
Trachea5.4
TrigeminalGanglion11.3
Uterus5.25
UterusCorpus6.55
WholeBlood7.2
Wholebrain6
colon6.6
pineal_day8
pineal_night7.94
retina8
small_intestine6.25
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P316136
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.75 ± 0.94
Basal Forebrain3.68 ± 0.93
Basal Part of Pons3.3 ± 0.81
Cerebellar Cortex3.17 ± 0.69
Cerebellar Nuclei3.05 ± 0.46
Claustrum4.79 ± 0.62
Epithalamus2.74 ± 0.79
Frontal Lobe3.27 ± 0.81
Globus Pallidus3.12 ± 0.54
Hypothalamus3.49 ± 0.43
Insula3 ± 0.71
Limbic Lobe3.57 ± 0.8
Mesencephalon3.26 ± 0.69
Myelencephalon3.22 ± 0.74
Occipital Lobe3.06 ± 0.74
Parietal Lobe3.46 ± 0.7
Pontine Tegmentum3.29 ± 0.83
Striatum3.48 ± 0.89
Subthalamus2.94 ± 0.63
Temporal Lobe3.07 ± 0.76
Thalamus2.85 ± 0.82
White Matter2.64 ± 0.16
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
C630007C17RikCBCerebellum9.39
11.12
C630007C17RikCTXCerebral cortex25.9
23.11
C630007C17RikHIPHippocampal region24.16
37.74
C630007C17RikHPFHippocampal formation21.27
27.32
C630007C17RikHYHypothalamus8.61
8.47
C630007C17RikLSXLateral septal complex30.92
27.77
C630007C17RikMBMidbrain12.18
12.94
C630007C17RikMYMedulla21.77
27.58
C630007C17RikOLFOlfactory bulb37.03
43.96
C630007C17RikPPons15.65
20.04
C630007C17RikPALPallidum30.38
39.19
C630007C17RikRHPRetrohippocampal region17.97
15.76
C630007C17RiksAMYStriatum-like amygdalar nuclei27.62
27.95
C630007C17RikSTRStriatum20.92
17.29
C630007C17RikSTRdStriatum dorsal region14.18
11.1
C630007C17RikSTRvStriatum ventral region34.05
25.12
C630007C17RikTHThalamus74.05
86.53
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved